Pairwise Alignments

Query, 556 a.a., tetratricopeptide repeat protein from Paraburkholderia sabiae LMG 24235

Subject, 556 a.a., Tfp pilus assembly protein PilF from Dechlorosoma suillum PS

 Score =  282 bits (722), Expect = 2e-80
 Identities = 185/484 (38%), Positives = 253/484 (52%), Gaps = 20/484 (4%)

Query: 76  NLAELLLRRGRLQEAEASGRRAIDVDPRCGLAHFYLAETLTRTARPREAEAAYRRSIELE 135
           NLA      G+ + A     R ++++P   LA+  L +   +  +   AE + R ++ L 
Sbjct: 77  NLAVNAFNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLA 136

Query: 136 PKMLAVRNNLGNLLLHENRFDDAIATFGEALDIDGTYIHALYNLGMALLRSVRPAEAEMA 195
           P    + NNLG +LL +N+  +A   F +AL +   +  A+ NL   L    R AEA   
Sbjct: 137 PDTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAEALEH 196

Query: 196 FRRALAVQPDHRDALHNLGTALKLTGRYDEAEAVYRQTLALAPDFADAHWNLAVLLLTQG 255
            RRA A+ P       NLG  LK  G + EA    RQ +ALAPD+A AHWN A+ LL  G
Sbjct: 197 CRRAAALAPRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWNYAMSLLALG 256

Query: 256 RLAEGWPHAEARYAPQRAPKDIPPPAGTPQWQGESLDGKTLVLWHEQGYGDCVQFARYAP 315
           +L  GW   E   A     +     A  P+WQGE L GK L+L  EQG GD +QF R+AP
Sbjct: 257 QLEAGWQEYEWGAAAGTRTRF---AATLPRWQGEDLAGKHLLLRAEQGLGDTLQFVRFAP 313

Query: 316 LLKALGVRHLTLMCPAPLKPLMETLDSIDAVTTHSGQIGQHDFWAYP-----LSLPLRFG 370
            L+  G + +TL C   L PL++ +  ID +   +G++   D W        +SLP    
Sbjct: 314 ELQRRGAK-VTLECQPSLIPLLQGVAGIDHLVAQTGEL-PADAWGCQCYLPLMSLPHLLH 371

Query: 371 TTLDTIPAALPYLRALPERVERWRVHLSKAPGLKIGLVWKGFAGNQHDATRSLPDLTPLA 430
             L  +P  +PYL     RV  W+  L      ++GL W G   +++D  RS P L    
Sbjct: 372 IGLADLPGPIPYLPLEAGRVRHWQDMLGPRSRFRVGLAWAGNPRHRNDHQRSCP-LAQFV 430

Query: 431 PLWTVAGVTFFSLQKGQGEDEAAAPPDGQPIVSLGSGIEDFADTAAIIAQLDLLIAVDTA 490
            L  V GV F SLQ       AA  P G  +  + +GI DFADTAAI++QLDL+I+VDTA
Sbjct: 431 ELLAVPGVEFISLQL-----PAAELPQG--LRDVTAGIRDFADTAAIVSQLDLVISVDTA 483

Query: 491 AAHVAGALGKPCWLMLPHDWTDWRWLLERDDTPWYPGVMRLFRQSAADDWREVAERMADA 550
             H+AGALG+P WL+LP D  DWRWL ER D+PWYP  ++L+RQ     W  V + +   
Sbjct: 484 IIHLAGALGRPAWLLLPRD-ADWRWLQERQDSPWYPS-LKLYRQKMPGQWLPVLQSVRRD 541

Query: 551 LRHL 554
           L  L
Sbjct: 542 LESL 545



 Score = 62.4 bits (150), Expect = 4e-14
 Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 2/152 (1%)

Query: 124 AEAAYRRSIELEPKMLAVRNNLGNLLLHENRFDDAIATFGEALDIDGTYIHALYNLGMAL 183
           AE A+  + +L P+   V  NLG       R + A   + +A  +   ++  + NL +  
Sbjct: 23  AEQAFAAAAQLAPQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQLAPDHVPCITNLAVNA 82

Query: 184 LRSVRPAEAEMAFRRALAVQPDHRDALHNLGTALKLTGRYDEAEAVYRQTLALAPDFADA 243
               +   A     R + ++P +  A  NLG   +  G+Y+ AE   R  L LAPD  + 
Sbjct: 83  FNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNALLLAPDTPNL 142

Query: 244 HWNLAVLLLTQGRLAEGWPH--AEARYAPQRA 273
           H NL ++LL Q +LAE         R APQ A
Sbjct: 143 HNNLGLILLDQNKLAEAEQAFLQALRLAPQHA 174



 Score = 58.5 bits (140), Expect = 6e-13
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 1/181 (0%)

Query: 5   PANFQAAFEAHLAGRLDEAERGYRAVLEHDPHHADALHLLGVVLSARGVWIEGEALLHRA 64
           P     A  A   G+ + A +     +E +P +A A   LG +    G +   E  L  A
Sbjct: 73  PCITNLAVNAFNLGKTEMALQLTLRQVELEPGNALAYDNLGQIFRQLGQYEGAELSLRNA 132

Query: 65  IALRDDA-HFHANLAELLLRRGRLQEAEASGRRAIDVDPRCGLAHFYLAETLTRTARPRE 123
           + L  D  + H NL  +LL + +L EAE +  +A+ + P+   A   L+  L    R  E
Sbjct: 133 LLLAPDTPNLHNNLGLILLDQNKLAEAEQAFLQALRLAPQHADAMTNLSTVLQAQGRTAE 192

Query: 124 AEAAYRRSIELEPKMLAVRNNLGNLLLHENRFDDAIATFGEALDIDGTYIHALYNLGMAL 183
           A    RR+  L P+      NLGN+L       +A+    +A+ +   Y  A +N  M+L
Sbjct: 193 ALEHCRRAAALAPRSAVTWTNLGNVLKSMGLHQEALEAQRQAIALAPDYALAHWNYAMSL 252

Query: 184 L 184
           L
Sbjct: 253 L 253



 Score = 35.0 bits (79), Expect = 8e-06
 Identities = 23/67 (34%), Positives = 27/67 (40%)

Query: 190 AEAEMAFRRALAVQPDHRDALHNLGTALKLTGRYDEAEAVYRQTLALAPDFADAHWNLAV 249
           A AE AF  A  + P       NLG      GR + A   Y +   LAPD      NLAV
Sbjct: 21  AGAEQAFAAAAQLAPQAWQVHFNLGMCRDRLGRREAAFTAYEKAYQLAPDHVPCITNLAV 80

Query: 250 LLLTQGR 256
                G+
Sbjct: 81  NAFNLGK 87