Pairwise Alignments

Query, 491 a.a., transcription termination factor NusA from Paraburkholderia sabiae LMG 24235

Subject, 428 a.a., N utilization substance protein A (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  296 bits (759), Expect = 7e-85
 Identities = 157/411 (38%), Positives = 263/411 (63%), Gaps = 8/411 (1%)

Query: 1   MSREVLMLVDALAREKNVDKDVVFAALEAALASASKKLFDEDADIRVHIDRESGEHETFR 60
           MS E+   +D ++++K +++D++ A LE A+ ++  + + +D D+ V  + ESGE E ++
Sbjct: 1   MSMELKKAIDQISKDKGLERDMLVATLEEAVRTSVVRKYGDDIDVEVSYNDESGEIEVYQ 60

Query: 61  RWKVVPDEAGLQEPD--QEILLFEAREQKADAQIDDFLEEPVPSIEFGRIGAQAAKQVIL 118
            +K+V  E   ++ D    I+L EAR+     QIDD +   +   + GRI AQ+AKQVI+
Sbjct: 61  -FKIVVAELDDEDEDGNAHIVLEEARKHDPSVQIDDEMGFRLKVEDLGRIAAQSAKQVII 119

Query: 119 QKVRDAEREQILNDFLERGESIMTGTVKRLDKGNFIVESGRVEALLRRDQLIPKENLRVG 178
           Q++RDAE+E I ++F +R   I++G ++R DK  +I+  GR EALL +++ IP+E+ + G
Sbjct: 120 QRMRDAEQELIYDEFKDRRGEIISGIIQRRDKAGWIINLGRTEALLPKEEQIPREHYKRG 179

Query: 179 DRVRAYIGKVDRTARGPQIELSRTAPEFLMKLFEMEVPEIEQGLLEIKAAARDPGVRAKI 238
           DRV+A I +V +  RGPQ+ +SR+  +++  LF  EVPE++ G ++I   ARDPG RAK+
Sbjct: 180 DRVQAIIIEVRKEGRGPQVIVSRSHRDYMAALFRREVPEVDDGTVQIMGVARDPGSRAKV 239

Query: 239 GVVAYDKRIDPIGTCVGIRGSRVQAVRNELGGENVDIVLWSEDPAQFVIGALAPAAVQSI 298
            V++ ++ +DP+G CVGIRGSR+Q V  EL GE +DIV+WS + A +   AL+PA +  I
Sbjct: 240 AVLSRERDVDPVGACVGIRGSRIQNVVQELRGERIDIVVWSPEIATYARNALSPAVISRI 299

Query: 299 VVDEEKHSMDVVVDENELAVAIGRSGQNVRLASELTGWQINIMTPDESAQKQNQERSVLR 358
           VVDEE++ ++V+V +++L  AIGR GQNV+LA++L GW+I+I T     +     R + +
Sbjct: 300 VVDEEENLLEVIVPDDQLTNAIGRKGQNVKLAAKLLGWKIDIYTETRYNEANAIGRGLEQ 359

Query: 359 DLFMARLDVDEEVADILIDEGFTSLEEIAYVPLNEMLEIEAFDEDTVHELR 409
              +A + +++      +  GF S+E +      E+      D++ + +LR
Sbjct: 360 IASVAEISIEQ-----FVTAGFQSIERLREASDEELASGLGIDDNRIADLR 405