Pairwise Alignments

Query, 818 a.a., ribonuclease R from Paraburkholderia sabiae LMG 24235

Subject, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

 Score =  669 bits (1726), Expect = 0.0
 Identities = 384/825 (46%), Positives = 516/825 (62%), Gaps = 47/825 (5%)

Query: 4   YPYPIPSREEILGVLRTSETPLAANDIAEALSIKRQER-EGFFKRLAAMERDGQIRLDQR 62
           Y  PIPSRE IL  L  +  P+  ND+ EAL ++ +E+ EG  +RL AMERDGQ+   +R
Sbjct: 18  YDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRR 77

Query: 63  GHYQLTHPSNFVAGRVQGHRDGYGFLIRDDG----QDDLFLPTGEMQKVMHNDRVLARIV 118
             Y L      V G V GH+DG+G+ +R +G    + D+ LP  +M+ ++H D VL +  
Sbjct: 78  QCYALPEKLEMVKGYVIGHKDGHGW-VRPEGSLNKEGDILLPHHQMRTLIHGDFVLVQPS 136

Query: 119 GYDRRGRPEGHIVEVTDRANKRVIGRLLNENGALIVVPEEKRIGHDILITQNTKK-AKVG 177
           G D+RGR EG +V + +  N +++GR   E G   VVP++ RI HDILI  + +  A++G
Sbjct: 137 GTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPNDLRAGARMG 196

Query: 178 QVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQAALDAAAKLP 237
            VVV+E+TD  +R+   +G+VVEVLG+   PGME +IA+R + +PHE+        A L 
Sbjct: 197 NVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQQVAGLT 256

Query: 238 DEVRPVDIKHRVDLRDVPLVTIDGEDARDFDDAVYCEPVKVGRGEGFRLIVAIADVSHYV 297
           +EV     + RVDLR +PLVTIDGEDARDFDDAVYCE  K   G G+RL VAIADVS+YV
Sbjct: 257 EEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKK---GGGWRLWVAIADVSYYV 313

Query: 298 LPDGGLDVDAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPQVDRCVLVCDVVITARGEIK 357
            PD  LD +AI R  SVYFP +V+PMLPE LSNGLCSLNPQVDR  +VC++ ++  G++ 
Sbjct: 314 RPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGKLS 373

Query: 358 AYQFYPGVMHSAARLTYTEVAAVLTNTKGPEATRRA--ALLPHLQNLYGVYKALFAARQK 415
            Y+ Y  VM+S ARLTYT+V  +L   +G E  R    AL+PHL+ L+ +Y+ L +AR +
Sbjct: 374 GYKHYEAVMNSHARLTYTKVHEIL---EGDEELRERYKALVPHLEELHKMYQVLKSARDE 430

Query: 416 RGAIDFDTTETYIVCNAQGKIEQIVPRHRNDAHKLIEECMLAANVCAADFMKRNKHPGLY 475
           RGAI+F+T ET  + NAQ KIE I P  RNDAHKLIEECM+ AN+ +A  +++ K   LY
Sbjct: 431 RGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALY 490

Query: 476 RVHAGPTTERLENLRTFLRGMGLTLGGGDTPHASDYAALMAHIRDRPDAQMLQTMLLRSM 535
           RVH  P  ERL   R FL  +GL L GG  P  +DYA LM  I +RPD +++QTMLLRSM
Sbjct: 491 RVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLLRSM 550

Query: 536 QQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAIL---QGRKYEPKAPHGVE 592
           +QAVY+ DN GHFGLA + YAHFTSPIRRYPDLL HRAI  ++   +GR  +   P    
Sbjct: 551 KQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTP---- 606

Query: 593 LNTALSPRARAMQAEDEKRTGRGRPNTAIWEELGMHCSANERRADEASRDVEAWLKCYFM 652
                              TG    +    +  G  CS  ERRAD+A+R+V  WLKC +M
Sbjct: 607 -------------------TGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYM 647

Query: 653 RDKLGEEYGGMVSGVTSFGIFVQLDALFIEGLVHVTELGSDYFQYDEIKNELRGERTGIR 712
           +D +GEE  G+V+ VTSFG FV+L  L I+GLVH++ L +DY+ YD I   L GE  G  
Sbjct: 648 QDHVGEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAI 707

Query: 713 YRLSDRVRVQVSRVDLDARKIDFRLVRDTPVKSQHRATTAEKASDLGGGPRVRSMERAAQ 772
           YRL D V+V+V  V+LD R+IDF LV +T  K + +  TA+K +D     R ++  +   
Sbjct: 708 YRLGDAVKVKVLAVNLDDRQIDFELV-ETSRKLRGQGKTAKKRAD---EARAKAQGKKEA 763

Query: 773 VEGGRRKKAPPAQTAAVKEARAARKAAASKKRAASKSSAKPAHKK 817
              G   K+P    + +K    A +   S+ R+  K +  P  +K
Sbjct: 764 ATKGACGKSP--TKSELKPQVEATRRPDSEGRSKPKKTKAPKKRK 806