Pairwise Alignments

Query, 818 a.a., ribonuclease R from Paraburkholderia sabiae LMG 24235

Subject, 886 a.a., ribonuclease R (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  395 bits (1014), Expect = e-114
 Identities = 265/789 (33%), Positives = 396/789 (50%), Gaps = 60/789 (7%)

Query: 11  REEILGVLRTSETPLAANDIAEALSIKRQEREGFFKRLAAMERDGQIRLDQRGHYQLTHP 70
           R+ ++   R ++ PL  + +   L + R+E+    + L A++ +G+I   + G + LT  
Sbjct: 16  RDALMQAFREAQRPLRLDMLLRILGLHRKEKRTLEESLEALQAEGRILRLRGGAWGLTDH 75

Query: 71  SNFVAGRVQGHRDGYGFLIRDDGQ-DDLFLPTGEMQKVMHNDRVLARIVGYDRRGRPEGH 129
              V G +Q  R G GF++ +D +  D+++   +M +  H D+V+  ++   R   PEG 
Sbjct: 76  MKMVTGTLQVQRTGMGFVLPEDRRRTDIYVHPTQMGEAWHGDKVVVVLLPGGRGRNPEGR 135

Query: 130 IVEVTDRANKRVIGRLLNENG--ALIVVPEEKRIGHDILI--TQNTKKAKVGQVVVVELT 185
           IV + +R  K +  R++   G   L+    + RI    L+  T    K +   ++VV   
Sbjct: 136 IVRILERGLKEMPARVVKRMGRQGLLCRAADARIKVHFLVDVTGLEGKPQKDDILVVS-- 193

Query: 186 DFPSRHSQP---LGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQAALDAAAKLPDEVRP 242
             P    +        V  LG  DD  ++  +    +GVP EF    L+ AA LP     
Sbjct: 194 --PGERVEDGLWAATAVRHLGSEDDVSVQERLVKINHGVPTEFPVPVLEEAATLPPAPGG 251

Query: 243 VDIKHRVDLRDVPLVTIDGEDARDFDDAVYCEPVKVGRGEGFRLIVAIADVSHYVLPDGG 302
            D   R+DLR +  VTIDG  ARDFDDA+  E     +G+G+RL VAIADVSHYV P   
Sbjct: 252 GDFADRIDLRHMEFVTIDGARARDFDDAICVEE----QGKGWRLWVAIADVSHYVRPGSA 307

Query: 303 LDVDAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPQVDRCVLVCDVVITARGEIKAYQFY 362
           +D +A+ERS S YFP+ V PMLPE LSNGLCSLNP+V R  +V ++     G     +FY
Sbjct: 308 MDREALERSNSYYFPQSVEPMLPEALSNGLCSLNPRVPRLAMVAEIYFFGEGSPGKCKFY 367

Query: 363 PGVMHSAARLTYTEVAAVLTNTKGPEATRRAALLPHLQNLYGVYKALFAARQKRGAIDFD 422
           P V+ S ARLTY +V   L      E      +LP L+    + + L   R++RG++DFD
Sbjct: 368 PAVIESKARLTYGQVNRALLLGDEEERLVLRPVLPMLEQAEKLARVLHQRRRERGSLDFD 427

Query: 423 TTETYIVCNAQGKIEQIVPRHRNDAHKLIEECMLAANVCAADFMKRNKHPGLYRVHAGPT 482
             E  I  N  G+   I  + R+  H+++EE M+AAN   A F+   +   LYRVH  P 
Sbjct: 428 LPEPEIAFNIYGETVDIRRKVRHFGHQIVEEFMIAANEAVARFLTEKEADFLYRVHPEPE 487

Query: 483 TERLENLRTFLRGMGLTLGGGDTPHASDYAALMAHIRDRPDAQMLQTMLLRSMQQAVYSP 542
            E+L  L   L G  +  G      A     ++          ++  + LR+M QA YSP
Sbjct: 488 PEKLSALFKVLAGTDIAQGLPREASAGALQTVLQKAHGSAQEFLISRLTLRTMMQARYSP 547

Query: 543 DNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYEPKAPHGVELNTALSPRAR 602
           ++ GHFGLA   Y HFTSPIRRY DL+ HRA+   L G                      
Sbjct: 548 EHEGHFGLASACYCHFTSPIRRYADLVVHRALKRALGG---------------------- 585

Query: 603 AMQAEDEKRTGRGRPNTAIWEELGMHCSANERRADEASRDVEAWLKCYFMRDKLGEEYGG 662
                D   T  G    AI ++L  H    ER+A EA R++   L    +R ++GE   G
Sbjct: 586 -----DPGPTPAGGKLVAIADQLSQH----ERKAMEAEREILKRLTVLLLRSRVGETLTG 636

Query: 663 MVSGVTSFGIFVQLDALFIEGLVHVTELGSDYFQYDEIKNELRGERTGIRYRLSDRVRVQ 722
           ++S +  FG FV+L+ +  +G+V ++ L  DY+ +   + ELRGERTG  +RL  +V+V+
Sbjct: 637 VISSILDFGFFVELNEVLADGMVRLSSLDDDYYAFIPERQELRGERTGRTFRLGQQVKVR 696

Query: 723 VSRVDLDARKIDFRLVR----DTPVKSQHRATTAEK----ASDLGGGPRVRSMERAAQVE 774
           ++ V++   +++  LVR    DTPV ++ R+  + +        G G R RS   A    
Sbjct: 697 LADVNVGRLEVNLELVREEGDDTPVPTRRRSAASGRDGSGRDGSGRGGRGRSRHDATP-- 754

Query: 775 GGRRKKAPP 783
              R KA P
Sbjct: 755 ---RVKASP 760