Pairwise Alignments

Query, 865 a.a., ATP-dependent chaperone ClpB from Paraburkholderia sabiae LMG 24235

Subject, 862 a.a., endopeptidase Clp ATP-binding chain B (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  890 bits (2299), Expect = 0.0
 Identities = 465/868 (53%), Positives = 622/868 (71%), Gaps = 16/868 (1%)

Query: 1   MRIDKLTTKFQEALADAQSLAVGHDNQYIEPVHLLAALVAQQDGSARSLLARAGVHVQAL 60
           M  +  T K QEA+ +A +L      Q IEP H+L  ++   +     +  + G++ Q +
Sbjct: 1   MNFNNFTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIFQKLGMNGQQV 60

Query: 61  QTALADAITRLPQVQGTDGNVQIGRDLTGLLNQADKEAQKLNDTYIASEMFLLSVADDKG 120
              +   I  LP+V G  G   + R+   +L +A + ++++ D +++ E  LL++   K 
Sbjct: 61  ALVVDKQIESLPKVSG--GEPYLSRESNEVLQKATQYSKEMGDEFVSLEHILLALLTVKS 118

Query: 121 EAGRLAREHGLSRKSLEAAIVAVRGGAQVHSQDAESQREALKKYTIDLTERARAGKLDPV 180
               + ++ G++ K L  AI  +R G +V SQ +E   ++L+KY I+L E AR+GKLDPV
Sbjct: 119 TVSTILKDAGMTEKELRNAINELRKGEKVTSQSSEDNYQSLEKYAINLNEAARSGKLDPV 178

Query: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240
           IGRD+EIRR +QIL RRTKNNP+LIGEPG GKTAIVEGLA RI+ G+VPE LK K+V SL
Sbjct: 179 IGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAHRILRGDVPENLKNKQVYSL 238

Query: 241 DMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300
           DM AL+AGAKY+GEFEERLK+V+N++ K EG  I+FIDEIHT+VGAGK EGAMDA N+LK
Sbjct: 239 DMGALVAGAKYKGEFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGKGEGAMDAANILK 298

Query: 301 PALSRGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELH 360
           PAL+RGEL  +GATTLDEY+KY EKD ALERRFQ V VDEP   +TI+ILRGL+ERYE H
Sbjct: 299 PALARGELRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTISILRGLKERYENH 358

Query: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRI 420
           H V I D AI+AA ELS RYITDRFLPDKAIDL+DEAA+K++ME+DS PEE+D + R+  
Sbjct: 359 HHVRIKDDAIIAAVELSSRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIK 418

Query: 421 QLKIEREAVKKEKDEASQKRLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIE 480
           QL+IEREA+K+E D   + +L++I +E+  L       +  W +EK  +    Q K EIE
Sbjct: 419 QLEIEREAIKREND---KPKLEIIGKELAELKEVEKSFKAKWQSEKTLMDKIQQNKVEIE 475

Query: 481 KTRAEITRLQREGKLEKVAELQYGKLPQLEQQLKAVTKAEAEEQSNPTRPRLLRTQVGAE 540
             + E  + +REG   KVAE++YGKL  L+++++   +     Q +     +++ +V AE
Sbjct: 476 NLKFEAEKAEREGDYGKVAEIRYGKLQALDKEIEDTQEKLRGMQGDKA---MIKEEVDAE 532

Query: 541 EIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHQRVVGQDEAISAVADAIRRSRAGLSDP 600
           +IA+VVSR TGIPVS+MMQ E++KLL +E++LHQRV+GQDEAI AVADA+RRSRAGL DP
Sbjct: 533 DIADVVSRWTGIPVSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDP 592

Query: 601 NRPYGSFLFLGPTGVGKTELCKALAAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYV 660
            RP GSF+FLG TGVGKTEL KALA FLFD E  + RIDMSE+ EKHSV+RL+GAPPGYV
Sbjct: 593 KRPIGSFIFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPPGYV 652

Query: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720
           GY+EGG LTEA+RRKPYSV+L DEIEKAHPDVFN+LLQVLDDGR+TD +GR V+FKNT+I
Sbjct: 653 GYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTII 712

Query: 721 VMTSNLGSQVIQSMVGEPQDAVKDAVWEE--------VKLHFRPEFLNRIDDVVVFHALD 772
           +MTSN+GS  IQS + +   + K+ V EE        +K + RPEFLNRID+ ++F  L 
Sbjct: 713 IMTSNMGSSYIQSQMEKLSGSNKEEVIEETKKEVMNMLKKNIRPEFLNRIDETIMFLPLT 772

Query: 773 RSNIQSIAKIQLERVHERLAKLDMQLVVSDAALELIGKVGYDPLFGARPLKRAIQQEIEN 832
            + I+ I  +Q++ V + LA+  ++L ++DAAL  + +VGYDP FGARP+KRAIQ+ + N
Sbjct: 773 ETEIRQIVLLQIKGVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLN 832

Query: 833 PVAKLILAGKFGPKDVIPVEVDNGKLVF 860
            ++K +L+ +      I V+ +   LVF
Sbjct: 833 DLSKKLLSQEVDRSKAIIVDSNGDGLVF 860