Pairwise Alignments

Query, 435 a.a., chloride channel protein from Paraburkholderia sabiae LMG 24235

Subject, 468 a.a., ClC family H(+)/Cl(-) exchange transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 2e-35
 Identities = 116/394 (29%), Positives = 183/394 (46%), Gaps = 39/394 (9%)

Query: 57  LWWLPLVLTPAVGALGVWITRRFFPGAEGSGIPQVIATLHEGRDLGP-RLLNLRILGGKI 115
           LW    +++  +  +G ++  RF P A GSGIP++   +   R +   R+L ++  GG  
Sbjct: 76  LWLAAFLISAFLAFIGYFLVHRFAPEAAGSGIPEIEGAMDGMRPVRWWRVLPVKFFGGMG 135

Query: 116 AVSFLSILGGFTIGREGPTIHVGASLMFSLRRFYPERLRNIRGAELERKLALAGAAAGLS 175
           A+       G  +GREGPT+ +G ++   +   +      ++  +    L  AGAA GL+
Sbjct: 136 ALG-----SGMVLGREGPTVQMGGAVGRMISDIF-----RVKNEDTRHSLLAAGAAGGLA 185

Query: 176 AAFNAPLAGVVFAIEELTRSFEQRTSGV--LITAIIFAGIVSLGLQGNYTYFGTIDIDGH 233
           AAFNAPLAG++F IEE+   F      V  +I + + A IV   + G          D  
Sbjct: 186 AAFNAPLAGIMFVIEEMRPQFRYTLISVRAVIISAVAANIVFRVINGQDAVITMPQYDA- 244

Query: 234 FPDLLAVAV-VMLGVVTGVAGGVFCWLLLNTERWMPAKLVAWRKTHPVA---FGAACGLF 289
            P+L  + + ++LG + GV G +F +L+   +          RK + +     G   GL 
Sbjct: 245 -PELSTLGLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGCFGLL 303

Query: 290 IAVIGVAAGGHTFGSGYAEARGMLEGNSQLGATYPLLKMASMVGSYL----PGAPGGLFA 345
           +  +    GG     G +    +  G    GA   LL     + + L     GAPGG+FA
Sbjct: 304 LLYVPELTGG-----GISLIPTITNGG--YGAGILLLLFVGRIFTTLLCFGSGAPGGIFA 356

Query: 346 PSLAIGAGIGNALHLVFGQMQLP-------MLIALGMVGYLAAVTQSPITAFVIVIEMIN 398
           P LA+G   G A  L+  +M  P       M    GM    AA  ++PIT  ++VIEM N
Sbjct: 357 PMLALGTLFGYAFGLI-AKMWFPELNIEPGMFAIAGMGALFAATVRAPITGILLVIEMTN 415

Query: 399 GHALVLSLMATALISSQVSKLF-APPLYEALAQR 431
            + L+L L+ T+L +   ++L    P+Y  L  R
Sbjct: 416 NYHLILPLIITSLGAVIFAQLLGGQPIYSQLLHR 449



 Score = 33.5 bits (75), Expect = 1e-05
 Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 17/198 (8%)

Query: 23  GVFWLGAIATGLVAVMYARLIDFGYDAFLRYTAMLWWLPLVLTPAVGALGVWITRRFFPG 82
           G+F L     G+  V++  LI    D F+++        L+    +G     +   + P 
Sbjct: 251 GLFLLLGALFGVFGVLFNYLITLAQDLFVKFHRNDRKRYLLTGSMIGGC-FGLLLLYVPE 309

Query: 83  AEGSGIPQVIATLHEGRDLGPRLLNLRILGGKIAVSFLSILGGFTIGREGPTIHVGASLM 142
             G GI  +    + G   G  LL   +  G+I  + L    G   G   P + +G    
Sbjct: 310 LTGGGISLIPTITNGGYGAGILLL---LFVGRIFTTLLCFGSGAPGGIFAPMLALGTLFG 366

Query: 143 FSL----RRFYPERLRNIRGAELERKLALAGAAAGLSAAFNAPLAGVVFAIEELTRSFEQ 198
           ++     + ++PE   NI         A+AG  A  +A   AP+ G++  I E+T ++  
Sbjct: 367 YAFGLIAKMWFPE--LNIEPG----MFAIAGMGALFAATVRAPITGILLVI-EMTNNYHL 419

Query: 199 RTSGVL--ITAIIFAGIV 214
               ++  + A+IFA ++
Sbjct: 420 ILPLIITSLGAVIFAQLL 437