Pairwise Alignments

Query, 520 a.a., tetratricopeptide repeat-containing glycosyltransferase family protein from Paraburkholderia sabiae LMG 24235

Subject, 595 a.a., TPR repeat (NCBI) from Rhodospirillum rubrum S1H

 Score =  203 bits (517), Expect = 1e-56
 Identities = 179/557 (32%), Positives = 243/557 (43%), Gaps = 84/557 (15%)

Query: 19  GQYDEAAALLNGILSVDPNHNEALEALGYVAAKQGDYARAADYAWRAAQPASTNPQQLHF 78
           GQ   A   L   ++ DP   + L  L    A     AR    A  AA+        L F
Sbjct: 59  GQPTAALESLGAAVAADPTRLDWLADLAVALAG----ARRPAEALSAAEGLPATAGALGF 114

Query: 79  AAHICQLAGRHADSLVLFERVLTAFPDHAESLH--------------------------- 111
            A   +  GR   ++ L +  L   PD AE LH                           
Sbjct: 115 RADRLEELGRRDQAIALLDDALRRHPDEAE-LHRRQGVLLRRAGRAAQAIAPWRALVALR 173

Query: 112 ---GAAMSLVATG--------EHARALQRLARLAQRYPQSAEVQYNRGTLLGQMERYDEE 160
               AA S +  G        E  +AL+R   LA   P   +  YN    L + +R ++ 
Sbjct: 174 PGDAAAWSSLGAGLGESGLDEEAEKALRRAVALAADEP---DWTYNLAHFLIERDRLEDA 230

Query: 161 LAAYRQAIALKPNFVRAYVNLGVALRDLHRFDEALQQFKKAVSIDTNDAGARTNRAQTNL 220
           L     A+A  P     + NLGV    L     A+   ++A+++D ++  AR + A   L
Sbjct: 231 LPLLDAAVARAPERAHYHTNLGVCRLGLGDIKGAIAAHRQALALDPDEPEARYDLAWALL 290

Query: 221 LLGEFEHGWREYEWRWLDGTMSHGL---PDAT-----LWTGKQPLDGKTLLVHAEQGFGD 272
           L G +E GW  +E RW  G  +      P  T     LW G+    G+TLL+HAEQGFGD
Sbjct: 291 LAGAWEEGWAAHEARWRMGRFTGRRAAGPAPTDWPMPLWDGQPLGPGRTLLLHAEQGFGD 350

Query: 273 TLQFIRFV--GRLSAMGARVIVRVQDALLPLLRGFPGTA-----EVIGETMPLPAFDYHI 325
           +L   R +      A  A+ I+    +L+ LL    G A      V+ +    PA D H+
Sbjct: 351 SLMMSRLIIPALARAGDAQGIIECPPSLVGLLAQSLGPALGPAVRVVAQAESPPAADAHL 410

Query: 326 PMLSLAFALKVRETDLRIESPYVHADQQLAAQFADGFAQDDARPRVGIVWSGSRTHLNDR 385
           P++SL   L V      I  P    D+ L A+ A       + PRVG+VW+G   +  DR
Sbjct: 411 PLMSLPHRLGVDSET--IPGP----DRWLRAEPAP--RPPSSPPRVGLVWAGDPGNRMDR 462

Query: 386 NRSIPLAQCMPLFDARAQFVSLVKDVREGDRAAVDELVARGVLRDVSDRLTS------FA 439
            RS P     PLFD        VKD   G   A   L       D+ D   +      FA
Sbjct: 463 LRSCPATALRPLFDR-------VKDA--GLDIAWTGLQLGPPAADLPDLPAALAPGGDFA 513

Query: 440 ETAALVAQLDIVIAVDTAVAHLAAALGKPVWIALPFTPDWRWQLKREDSPWYPQMRLFRQ 499
            TA +VA LD+VI VDTAV HLA  LG   W+ L + PD+RW + R+DSPWYP  RLFRQ
Sbjct: 514 ATARVVAALDLVIGVDTAVIHLAGGLGVETWVMLAYVPDYRWMMDRDDSPWYPSARLFRQ 573

Query: 500 AKRNEWSDVVQQLRAAL 516
           ++R +W  V+ Q+ AAL
Sbjct: 574 SRRGDWRGVIAQVAAAL 590



 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 10  ADAQQKFTAGQYDEAAALLNGILSVDPNHNEALEALGYVAAKQGDYARAADYAWRAAQPA 69
           ADA ++   G   EA  L   +L   P H  AL  LG +    G    A +    A    
Sbjct: 18  ADALRE--GGAPAEARDLYRLVLDRHPGHGPALAGLGRILLGLGQPTAALESLGAAV--- 72

Query: 70  STNPQQLHFAAHIC-QLAG--RHADSLVLFERVLTAFPDHAESLHGAAMSLVATGEHARA 126
           + +P +L + A +   LAG  R A++L   E      P  A +L   A  L   G   +A
Sbjct: 73  AADPTRLDWLADLAVALAGARRPAEALSAAE----GLPATAGALGFRADRLEELGRRDQA 128

Query: 127 LQRLARLAQRYPQSAEVQYNRGTLLGQMERYDEELAAYRQAIALKPNFVRAYVNLGVALR 186
           +  L    +R+P  AE+   +G LL +  R  + +A +R  +AL+P    A+ +LG  L 
Sbjct: 129 IALLDDALRRHPDEAELHRRQGVLLRRAGRAAQAIAPWRALVALRPGDAAAWSSLGAGLG 188

Query: 187 DLHRFDEALQQFKKAVSIDTND 208
           +    +EA +  ++AV++  ++
Sbjct: 189 ESGLDEEAEKALRRAVALAADE 210



 Score = 30.8 bits (68), Expect = 1e-04
 Identities = 31/147 (21%), Positives = 55/147 (37%)

Query: 18  AGQYDEAAALLNGILSVDPNHNEALEALGYVAAKQGDYARAADYAWRAAQPASTNPQQLH 77
           AG+  +A A    ++++ P    A  +LG    + G    A     RA   A+  P   +
Sbjct: 156 AGRAAQAIAPWRALVALRPGDAAAWSSLGAGLGESGLDEEAEKALRRAVALAADEPDWTY 215

Query: 78  FAAHICQLAGRHADSLVLFERVLTAFPDHAESLHGAAMSLVATGEHARALQRLARLAQRY 137
             AH      R  D+L L +  +   P+ A       +  +  G+   A+    +     
Sbjct: 216 NLAHFLIERDRLEDALPLLDAAVARAPERAHYHTNLGVCRLGLGDIKGAIAAHRQALALD 275

Query: 138 PQSAEVQYNRGTLLGQMERYDEELAAY 164
           P   E +Y+    L     ++E  AA+
Sbjct: 276 PDEPEARYDLAWALLLAGAWEEGWAAH 302