Pairwise Alignments

Query, 296 a.a., transcriptional regulator GcvA from Paraburkholderia sabiae LMG 24235

Subject, 303 a.a., DNA-binding transcriptional activator GcvA (RefSeq) from Shewanella sp. ANA-3

 Score =  189 bits (479), Expect = 9e-53
 Identities = 116/290 (40%), Positives = 156/290 (53%), Gaps = 3/290 (1%)

Query: 1   MKRTLPPLNALRAFEAAGRLGSFKEAAAELHVTHGAVSQQVRLLEEWLGASLFDRYNRRV 60
           M R LPPLNA++AFEAA R  SF  AA EL VT  AVS Q++ LE++LG  LF R NR +
Sbjct: 1   MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL 60

Query: 61  TLTPAAKVYLEEIGPLFERLAQATARYGVPETVSRTLTVNAPATFTLRWLVPRLATFRAA 120
            LT   + Y  +I  +F +LA AT R  +  +   +LTV+   +F ++WLVPRL+ F   
Sbjct: 61  LLTEEGQSYFLDIKDIFTQLADATDRL-LARSAIGSLTVSMSPSFAIQWLVPRLSKFSEK 119

Query: 121 HPDVEVRVETSNGPLESLNEHYDVVIRGGPDTFYGYSMRPFLSEERLPVCSPALL-ARVP 179
           +PD++VR++  +    SL +  DV I  G   + G       +E  +PVCSP LL    P
Sbjct: 120 NPDIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKP 179

Query: 180 LRKPGDLRHHTLLHTSSLPRLWPDWLANAQIAALKPAASLTFDHFYLTLQAAIDGIGIAM 239
           L KP DL++HTLLH  S    W  W     I  +       F H  L LQAA  G G+A+
Sbjct: 180 LSKPEDLKYHTLLHDMS-RHDWQAWFRQCGIHDINVNQGPIFSHSSLVLQAAAHGQGVAL 238

Query: 240 GPTALVSDDLAAGRLVAPFESPRLPSRSYCTYVADEKAGDELVVLFCSWI 289
           G + L   D+ AGRLV PF+   +   +Y        A    VV F  W+
Sbjct: 239 GYSVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWM 288