Pairwise Alignments

Query, 389 a.a., HPP family protein from Paraburkholderia sabiae LMG 24235

Subject, 139 a.a., CBS domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 6/133 (4%)

Query: 240 RDVMSAPVVSVSPDTTLRAAADLLQRHSIKALPVIDKRE-RVVGIVTRADLANKPKSVDL 298
           +D+M+   V +S   +L+ A  L+Q   ++ LPV+ +++    GI+T      K  S  +
Sbjct: 4   KDIMTPNPVCISDGASLKDAHLLMQSRGVRHLPVVGEQDGHYKGILTH----KKMISTVV 59

Query: 299 RLMEALAARLFKRDTHRGRLVSTVMTTHVRTVATGTPIVELVPFFADDGHHHIPVIDKHD 358
            L+        +R   R  LV  +M T  + ++   P+  +V +F ++    +PV+DK  
Sbjct: 60  SLLNKYGQGALERK-ERQYLVRELMDTDAQRLSDDEPLAVVVDYFIENKLGCLPVLDKEQ 118

Query: 359 RLVGIITQSDLIE 371
           R++GI+T SD ++
Sbjct: 119 RVLGIVTSSDFVK 131



 Score = 39.7 bits (91), Expect = 5e-08
 Identities = 21/68 (30%), Positives = 33/68 (48%)

Query: 229 AYARTFSELACRDVMSAPVVSVSPDTTLRAAADLLQRHSIKALPVIDKRERVVGIVTRAD 288
           A  R   +   R++M      +S D  L    D    + +  LPV+DK +RV+GIVT +D
Sbjct: 69  ALERKERQYLVRELMDTDAQRLSDDEPLAVVVDYFIENKLGCLPVLDKEQRVLGIVTSSD 128

Query: 289 LANKPKSV 296
                K++
Sbjct: 129 FVKLCKTL 136



 Score = 23.9 bits (50), Expect = 0.003
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 319 VSTVMTTHVRTVATGTPIVELVPFFADDGHHHIPVIDKHD-RLVGIITQSDLI 370
           V  +MT +   ++ G  + +        G  H+PV+ + D    GI+T   +I
Sbjct: 3   VKDIMTPNPVCISDGASLKDAHLLMQSRGVRHLPVVGEQDGHYKGILTHKKMI 55