Pairwise Alignments

Query, 207 a.a., RNA polymerase factor sigma-70 from Paraburkholderia sabiae LMG 24235

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 57.4 bits (137), Expect = 1e-13
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 4/155 (2%)

Query: 21  LDVLIENRRSLIQLARSFVGCSSRAEDVVHDVFIKLTGFPNQDDVRQPLAYVARMVRNAS 80
           L   I +R+ L+       GC + AED+  D ++KL     +  +  P AY+ R+  N  
Sbjct: 12  LQCYIHHRQQLVAHLTRLGGCRALAEDLAQDAWLKLAQIMPEQRLDNPKAYLFRIATNLL 71

Query: 81  IDACRRQSLENTWHTCEEDGLE-VPSPEPTPESALMTRDSLRHAFDALAQLPERTRSAFE 139
            DA RR++L       +E  LE + + +  P + +    +L+     LA LP R R  FE
Sbjct: 72  RDAMRRRALLG---ASDEGPLELIEAVQADPCALVENHCALQCVLRQLADLPPRCREVFE 128

Query: 140 RVRLREETLQETARALNVSQTLVHFMVRDAAKHCE 174
             RL   +  E A  L +S   V   +  A +  E
Sbjct: 129 LARLEGLSQAEIAERLGISVNTVIAQLAKARQRLE 163