Pairwise Alignments

Query, 323 a.a., YafY family protein from Paraburkholderia sabiae LMG 24235

Subject, 219 a.a., Helix-turn-helix type 11 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 5   RLVSMLLMLQVKGRVTAQALADEFDVSIRTVYRDIDQLSAAGVPIYADRGPGGGFALLDG 64
           RL +++  L      TA  LA  F V+ RT+YRD+D+L A GVP+     PG G+ L   
Sbjct: 6   RLKALIQSLGTGPARTAAELAARFGVTERTIYRDMDRLRAEGVPLAGT--PGQGYRLTAA 63

Query: 65  YRAKLTGITKAEAETLSIA-GLTGAASDLGLSEQLRAAQLKLVTALPDAAPDSSRIGSRL 123
           +      ++  E E L +   + G A D GL+    +   ++  AL +   D+   G+R 
Sbjct: 64  FALPPLALSARELEALHLGLSIVGEAGDAGLAAAAASLSARIDGALSE---DAGTAGARW 120

Query: 124 HIDPVGWYQRPSPTPWLTMLAGAVWEQKRVSMQYR 158
              P           +L  L  A+  +++++++ R
Sbjct: 121 GFTPTPTGTAAEYLRFLPTLRAALRARQKIALRLR 155