Pairwise Alignments

Query, 373 a.a., polyamine ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

Subject, 366 a.a., polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  342 bits (878), Expect = 7e-99
 Identities = 160/360 (44%), Positives = 247/360 (68%), Gaps = 3/360 (0%)

Query: 13  AALLAAAGITGLSATPAHAADTELNVYNWSDYIAKDTIPNFEKQTGIHVKYDNYDSDDTL 72
           A  L  AG+ G +A    +A+  + VYNWSDYIA+DT+ NF+K+TGI V YD +D+++ L
Sbjct: 9   ALALVTAGVLGSAAV---SAEEVVRVYNWSDYIAEDTLENFQKETGIRVIYDVFDTNEVL 65

Query: 73  QAKLLAGSSGYDIVVPTSNYMAKQIQAGVYQKLDKTQIPNLKNLDPTLMKLIADADPGNQ 132
           +AKLL+G SGYD+VVP+++++AKQI+AG + KLDK+++ N K+L+  LM  +  +DPGN+
Sbjct: 66  EAKLLSGRSGYDLVVPSAHFLAKQIKAGAFMKLDKSKLTNEKHLNKNLMTQLQKSDPGNE 125

Query: 133 YGVPWAYGTDGIGYNVQAVQKVLGANAPVDSWSLVFDPANLSKLKSCGVSFLDQAVDVFA 192
           + VP+ +GT GIG+NV  V++VLG +APVDSW L+F+PAN  KL  CG++ LD   ++  
Sbjct: 126 HAVPYLWGTTGIGFNVAKVKEVLGEDAPVDSWDLIFNPANAEKLAKCGIAVLDSPDEILP 185

Query: 193 ATLQYMHKDPNSTNPGDYQAAYEVLKKVRPYITQFNSSGYINDLANNDVCVVVGWSGDVG 252
             L Y+  +PNST+P DY+ A EVL K+RPY+  F+SS YI+DLAN ++C  +GWSGDV 
Sbjct: 186 PALNYLGLNPNSTDPADYEKAGEVLLKIRPYLKYFHSSRYISDLANGEICAAIGWSGDVL 245

Query: 253 IARRRTQEAKRSYEIKFSNVKEGGLLWFDVMVVPKDAPHPEAAMKWINFISDAKNNAGIT 312
            A+ R +EA    ++ +   KEG  LWFD+M +P DA + + A+ ++N++   +  A I+
Sbjct: 246 QAQARAEEAGNGQQVDYRIPKEGAPLWFDMMAIPADAANADNALTFMNYLMRPEVIASIS 305

Query: 313 NEVFYPTANRAARQFVTPAVAQDQTVYPADDVIARMTLMKPMPTEILRLENRLWAQLKTG 372
           N V Y  AN  +   +   VA++  VYP+++ +A++ L +  P +  R   R+W ++K+G
Sbjct: 306 NYVAYANANDGSNPLLDEEVAKNPAVYPSEETLAKLYLGEVRPMKTQRAMTRIWTKIKSG 365