Pairwise Alignments

Query, 272 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

Subject, 275 a.a., ABC-type spermidine/putrescine transport system, permease component II from Pseudomonas stutzeri RCH2

 Score =  144 bits (362), Expect = 3e-39
 Identities = 91/259 (35%), Positives = 140/259 (54%), Gaps = 8/259 (3%)

Query: 10  IALAIGFAFLYVPIVSLVVYSFNE-SQLVTVWTRFSTRWYSALLQDEELINAAWLSLRVA 68
           I  A+   FL VP++ +V  SFN  S LV     FS RWY AL    + + +   S+ +A
Sbjct: 19  ILCALVLLFLIVPVLVIVPLSFNSGSFLVYPLQGFSMRWYEALFSSADWMRSLKNSMLIA 78

Query: 69  LLTAFASVIIGTWAGFVLARMGRFRGFTLYTGMINAPLVIPEVIQGISLLLLFIEMGKWL 128
               F +V++GT A   L R   FRG  L   ++ +P+V+P VI G++  L F  +G   
Sbjct: 79  PAATFLAVVLGTLAAVGLTR-AEFRGKALLMTILISPMVVPVVIIGVASYLFFAPLGM-- 135

Query: 129 GWPAGRGIFTIWIGHVMLCISYVAIIVQSRVRDLHPSLEEAALDLGATPLRVFFFITLPL 188
               G    ++ + H +L + +V I V + ++  + +L  AA  LGA+PL  FF +TLPL
Sbjct: 136 ----GNSYLSLILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLTAFFRVTLPL 191

Query: 189 ISQALVAGWLLSFTLSIDDLVLSAFLSGPGSTTLPLVVFSRVRLGLNPEMNALATLFIAV 248
           I+  +++G L +F  S D++V++ FL+GP   TLP  +FS +R  L+P + A ATL I  
Sbjct: 192 IAPGVISGALFAFATSFDEVVVTLFLAGPEQITLPRQMFSGIRENLSPTIAAAATLLIGF 251

Query: 249 VTVGVVIANHFMQRAEKRR 267
               ++       RAEK R
Sbjct: 252 SIALLLTLEWLRGRAEKLR 270