Pairwise Alignments

Query, 565 a.a., DEAD/DEAH box helicase from Paraburkholderia sabiae LMG 24235

Subject, 578 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  311 bits (796), Expect = 6e-89
 Identities = 196/496 (39%), Positives = 267/496 (53%), Gaps = 29/496 (5%)

Query: 37  TFAELGLSAEIVSALTAAGYKNPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 96
           +F+ LGLSA I  A+T  GY  P+P+Q +AIPA + G+D++ ++ TG+GKTA F LP +E
Sbjct: 2   SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61

Query: 97  RFAQLQKAQTSQPREPRESNAAGARGRRPQPVARPGLLVLTPTRELAMQVTTAASTYGKH 156
             ++  KA+  Q R                       LVLTPTRELA QV+ +  TYGK+
Sbjct: 62  LLSKGNKAKAGQIRA----------------------LVLTPTRELAAQVSESVETYGKY 99

Query: 157 LRRLRTVSILGGVAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSQLQMLVLDEADR 216
           L  LR+  + GGV    Q+  L    ++LVATPGRLLD  ++  +  +QL++LVLDEADR
Sbjct: 100 LP-LRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADR 158

Query: 217 MLDMGFIDDIETIVAATPATRQTMLFSATLDGKIGSLTGRLLKDPERIEIKQHIEQRTNI 276
           MLDMGFI DI+ I+A  PA RQ ++FSAT   +I  L   L+  P  I +         +
Sbjct: 159 MLDMGFIRDIKKILAMLPAKRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTV 218

Query: 277 AQTVHYVDDRDHKDRLLDHLLRADGLDQAIVFTATKMDADQLAGRLADAGFESAALHGDL 336
            Q +  VD ++ K  LL  L++ +   Q +VF+ TK  A++LA  L  A   +AA+HG+ 
Sbjct: 219 KQWICPVD-KNQKSALLIQLIKQEDWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNK 277

Query: 337 PQGARNRTIRALRERRVRVLVATDVAARGIDIPGITHVFNYDLPKFAEDYVHRIGRTGRA 396
            QGAR + +   +   VRVLVATD+AARG+DI  +  V N+DLP   EDYVHRIGRTGRA
Sbjct: 278 SQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRA 337

Query: 397 GRSGIAVSLVHHAEQGALKRIERFVRAPLPVNVVEGFEPRKSPPANGRGGFGGRGR-PGG 455
           G  G AVSLV   E   L+ IER +   L    VEGF P  + P +     G   +    
Sbjct: 338 GALGQAVSLVSSEETKLLRDIERLINRVLERQEVEGFSPVHTLPESTLNAHGKENKIKAV 397

Query: 456 GNGGGRRFGGKPG--YGGSRDGNGGGYGSRDGNRGGYGARDGGNGGNGGNSAGRSWGDKP 513
            +    R  GKP    G  RDG          N  G  A+  G      +S   + G + 
Sbjct: 398 ASQRKHRSAGKPAPRAGSGRDGRKTPAPKTADN--GDLAQQKGQNAQPNSSQRNNQGQRS 455

Query: 514 AGGNREGGYNSGSREG 529
             G R       + +G
Sbjct: 456 HQGQRNQHQEQRNHQG 471