Pairwise Alignments

Query, 446 a.a., ribosome biogenesis GTPase Der from Paraburkholderia sabiae LMG 24235

Subject, 487 a.a., GTP-binding protein EngA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  453 bits (1165), Expect = e-132
 Identities = 229/465 (49%), Positives = 321/465 (69%), Gaps = 22/465 (4%)

Query: 1   MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG 60
           M PV+ALVGRPNVGKSTLFNRLTR+RDALVAD PGLTRDR YG   + G   ++VVDTGG
Sbjct: 1   MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLSGYE-FIVVDTGG 59

Query: 61  FEPVAKDGILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN 120
            +   ++GI  +MA Q+  A+EE+DV++F+ D R GL   D SIA +LR   +  F+V N
Sbjct: 60  IDGT-EEGIETKMAEQSLAAIEEADVVLFMTDARAGLTAADLSIAQHLRSRQKTTFVVAN 118

Query: 121 KAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMIN-------EALDVAYAGQPEE-- 171
           K +G+   +  A+F+ LGLG+   ++AA G GVT MI        EA+ +   G+ EE  
Sbjct: 119 KIDGIDADSACAEFWSLGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGIERQGEEEEVD 178

Query: 172 -----SEEEKAQHG------IKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIY 220
                 EE +A+        IK+AI+G+PNVGKSTL N ++GE+RV+ +D PGTTRDSIY
Sbjct: 179 ERQYTEEEAEAEQKRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIY 238

Query: 221 VDFERQGKKYTLIDTAGLRKRGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQD 280
           +  ER G++Y +IDTAG+R+R KV E IEKFSV+KTL+++ DANVV+L++DAR+ ++EQD
Sbjct: 239 IPMERDGREYVIIDTAGVRRRSKVHEVIEKFSVIKTLKAVEDANVVLLIIDAREGVAEQD 298

Query: 281 AHIAGFVVEQGRALVVGVNKWDGLDPHVRERTKNDLQRKLKFLEFAKFHFISAAEKTGIG 340
             + GF +  GRALV+ VNKWDG+D  +++R K++L R+L F++FA+ HFISA   TG+G
Sbjct: 299 LGLLGFALNAGRALVIAVNKWDGIDQGIKDRVKSELDRRLGFIDFARIHFISALHGTGVG 358

Query: 341 PLMRSVEDAYKAAMSKLPTPKLTRALIDAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVI 400
            L  S+E+AY +A  ++ T  LTR +  + +  QP      R KL+YAH GG NPPI+VI
Sbjct: 359 HLFESIEEAYDSATRRVSTSMLTRIMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVI 418

Query: 401 HGNALDAITDTYRRYLENRFRETFALTGTPLRIEFRSSTNPYADK 445
           HGN +  + D+Y+RY+ N FR +  + GTP+++ F+   NP+ +K
Sbjct: 419 HGNQVSKLPDSYKRYMMNYFRRSLKVVGTPIQLRFQEGDNPFENK 463