Pairwise Alignments

Query, 220 a.a., RlmE family RNA methyltransferase from Paraburkholderia sabiae LMG 24235

Subject, 209 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Pantoea sp. MT58

 Score =  182 bits (463), Expect = 3e-51
 Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 12/203 (5%)

Query: 10  WLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRAGQVIVDLGAAPGSWSQYVRNK 69
           WL +H +D YV  A ++G R+RA +KL EI + DKL + G  +VDLGAAPG WSQYV  +
Sbjct: 13  WLQEHFSDKYVLQAHKKGLRSRAWFKLDEIQQGDKLFKPGMTVVDLGAAPGGWSQYVVQQ 72

Query: 70  LAHGKNRDSQREGGIDGTIIALDLLPMEPIADVHFIQGDFREDSVLEQLEEVVGDRDVDL 129
           +            G  G +IA D+LPM+PI  V F+QGDFRE+SV+  L E VGD+ V +
Sbjct: 73  I------------GNKGRVIACDILPMDPIVGVDFLQGDFREESVINALLERVGDQKVQV 120

Query: 130 VISDMAPNLSGVAVADAARIEHVCDLALEFSQNHLKPDGALLVKCFHGSGYSQIVEKFKH 189
           V+SDMAPN+SG    D  R  ++ +LALE  ++ L P G+ +VK F G G+ + + + + 
Sbjct: 121 VMSDMAPNMSGTPAVDIPRSMYLVELALEMCRDILAPGGSFVVKVFQGDGFDEYLREIRS 180

Query: 190 QFKTVAARKPKASRDKSSETFIL 212
            F  V  RKP ASR +S E +I+
Sbjct: 181 LFTKVKIRKPDASRSRSREVYIV 203