Pairwise Alignments

Query, 249 a.a., DNA polymerase III subunit epsilon from Paraburkholderia sabiae LMG 24235

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (551), Expect = 3e-61
 Identities = 116/237 (48%), Positives = 160/237 (67%), Gaps = 10/237 (4%)

Query: 2   RQIILDTETTGLNARTG-----DRIIEIGCVELVNRRLTGNNLHFYVNPERDSDPGALAV 56
           RQ+ILDTETTG+N   G      RIIEIGCVE++NR+LTG + H Y+NP +  D  A+ V
Sbjct: 9   RQVILDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKLTGRHFHEYINPMQAIDEEAITV 68

Query: 57  HGLTTEFLSDKPKFAEIANELRDFLQDAELIIHNAPFDIGFLDAEFALL-GLPPFSKHCG 115
           HG+T EF++DKP FA+IA    +F+  AE++ HNA FD+ F+D EF+LL    P +    
Sbjct: 69  HGITNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDIC 128

Query: 116 EVIDTLVRAKSMFPGKRNSLDALCDRFGISNAHRTLHGALLDSELLAEVYLAMTRGQESL 175
           +V+D+L  AK + PG++N+LDALC R+GI N+ R LHGALLD+E+LA+VYL MT GQ   
Sbjct: 129 QVLDSLEIAKFLHPGQKNNLDALCKRYGIDNSRRELHGALLDAEILADVYLIMTGGQTK- 187

Query: 176 VIDMIGEAAGGEAGGTQRVKLDTLELVVLAASDDELSEHEALLDGLDKALKGTSVWR 232
             ++  E  G E+GG  R+  +   L V+ AS DEL+ HE  LD ++K+  G  +WR
Sbjct: 188 -FELSNEKPGQESGGIIRLANNRPSLKVIGASADELNMHEQRLDLVEKS--GQCIWR 241