Pairwise Alignments

Query, 734 a.a., ATP-dependent helicase from Paraburkholderia sabiae LMG 24235

Subject, 789 a.a., UvrD/REP helicase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  311 bits (798), Expect = 6e-89
 Identities = 217/645 (33%), Positives = 326/645 (50%), Gaps = 45/645 (6%)

Query: 30  DWLAKLNEAQREAVEYGTDDVAKPSGALLVIAGAGSGKTNTLAHRVANLVVKGTDPRRIL 89
           D+  +LN AQ +A            G LLVIAGAGSGKT T+ +R+ANLV +G     IL
Sbjct: 3   DYRNELNPAQYQAA-------TTLEGPLLVIAGAGSGKTRTIVYRLANLVEQGVPASAIL 55

Query: 90  LLTFSRRAALEMTRRVTRI----ASAALGTRAALAQGLTWSGTFHSVGARLLREYADLIG 145
           LLTF+R++A EM  R  R+    A+AA+        G+   GTFH+    +LR++     
Sbjct: 56  LLTFTRKSAREMLHRAGRLLEHSATAAVHGGVHGVTGVQ-GGTFHAFAYSVLRQFRPSGY 114

Query: 146 LSPTFTINDREDSADLMNLVRHELGFSAKEKRFPSKSACFAIYSRVVNTGASLADVLNSA 205
            +   T+ D  D  D +   +   G    ++ FP       + S+  N    + +V+   
Sbjct: 115 EAGDLTVMDGADIVDAVRHCKDNQGIGKGDRSFPRTQNIVGLISKSRNKELDIDEVIRRE 174

Query: 206 FPWCREWEADLRMLFAAYVDAKQKQSVLDYDDLLLYWSHMAAEPAIAAD-LSGRFDHVLV 264
                     +  + AAY   +++  +LDYDDLL     +  E A   D    RF +++V
Sbjct: 175 AFHLLVHAEGIGRIAAAYHAYRREHGLLDYDDLLFELERLLRERADVLDWCRARFRYIMV 234

Query: 265 DEYQDTNRLQASILLALKPDGRGLTVVGDDAQSIYSFRGATVRNILDFPAHFDPPAKQVT 324
           DEYQDTN +QA ++  L  +G  +  VGDDAQSIY+FRGA VRNILDFP  F P A+ + 
Sbjct: 235 DEYQDTNLVQARLVHLLAGEGGNVMAVGDDAQSIYAFRGADVRNILDFPKLF-PAAQIIK 293

Query: 325 LERNYRSTQPILEASNAVIDLSTERYTKNLWTDKASAQRPHLVTVADDADQARYIVEQVL 384
           LE NYRS QP+L+ +NA++  + + Y K L+  +    RP +V    D  QA  +V +++
Sbjct: 294 LEENYRSVQPVLDLTNAILAEAPQAYRKKLFAAREGGDRPQVVRPLSDLTQASLVVSRIV 353

Query: 385 AAREAGMKLKSQAVLFRAAHHSATLEIELTRRNIPFVKFGGLKFLDSVHVKDVLAVLRWA 444
               +       AVLFRA + S  +E++L +  + F K+GGL++ ++ HVKDVL+  R  
Sbjct: 354 EFLRS-YPPHDIAVLFRAGYQSYHVEVQLNKLGVKFRKYGGLRYSEAAHVKDVLSYARLV 412

Query: 445 ENPRDRVAGFRVVQLLPGVGPATAARVLDDIAARADALGSGSALDVAHGVSGCAAGALAA 504
            NP D  A  R+  +  GVGP T  ++                 DVA   +  A      
Sbjct: 413 LNPLDLPAFQRIAAMSKGVGPKTTLKL----------------YDVARQGNPEATSRACL 456

Query: 505 FAPPARTLEDWHLFVAMMASVCGRQTPWPAEFEMVRRWYEPHLERNH-EDASIRQADLVQ 563
             P  R   D      ++  +  R     +  E V   Y+P +E    +D   RQ  L Q
Sbjct: 457 RYPELRADLD------LLDGLRKRPHTPTSLLEEVMEHYKPRMEAAFPDDWPRRQQGLEQ 510

Query: 564 MESIAGTYASRERFLTELTLDPPDATSDESGVPLIDEDYLILSTIHSAKGQEWRNVFVLN 623
           +  IA +Y   + F+++L+L+ P    +       + D ++LSTIHSAKG EW  V +++
Sbjct: 511 LLQIAASYRDLDLFISDLSLEDPGEEEE-------NRDSVVLSTIHSAKGLEWGAVLLID 563

Query: 624 GVDGCIPSDLGTGSEEEIDEERRLLYVAMTRAKEDLHIVMPQRFY 668
            V+   PS       E+ +EERRL+YVA TRA++ L + +P   Y
Sbjct: 564 LVEERFPSRHAIARAEDFEEERRLMYVACTRARDHLCLFVPASLY 608