Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 444 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (644), Expect = 2e-71
 Identities = 157/418 (37%), Positives = 230/418 (55%), Gaps = 12/418 (2%)

Query: 27  GWHVEVVGSARDARRAVRSGMAAGGLLDLSSC-FQQHEIAAFESCLTMPNVGWVATTMAG 85
           GW    V   R A           G++DLS   F  + IA   S  +   V W+A     
Sbjct: 32  GWRCTQVADLRKADALFVETGPCIGIVDLSHDEFSLNGIANLVS--SHKQVRWLAFIREA 89

Query: 86  QLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMVSLGEPASNDASQGGSEGEMVG 145
           QL    + + + ++C D+ T P    +++ ++GH  GM+ L +         G+ G ++G
Sbjct: 90  QLSSDTICQFIVNFCIDFFTAPIPDAQLLSTIGHQLGMLKLEKKVWPHFGSAGNMG-LIG 148

Query: 146 SCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPP 205
               M  L   I+++  TD  + I GESGTGKE  A AIH+ SSR   PFI +NC A+  
Sbjct: 149 ESMPMKRLRDQIKRIGPTDVSILIYGESGTGKETVAKAIHKTSSRAQKPFISVNCRAMSE 208

Query: 206 HLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVE 265
             L+SELFG      T   Q+    +  A+GGTL L++I  LP   Q +LLRFLQE  VE
Sbjct: 209 KRLESELFGLGE---TEEGQQPF--LLQADGGTLLLNDILTLPKSQQLNLLRFLQEGTVE 263

Query: 266 RLGGHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLA 325
              G  +  VDVRI++A   D+  A+I+G F  +LYH + VL+I+ P L+ R  DI LLA
Sbjct: 264 TRQGVRA--VDVRILAANSSDIEKALIDGDFNEELYHYINVLRINVPSLKERASDIVLLA 321

Query: 326 RHMLERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARDLE 385
           +H L+ + K+ + + R F+ DA+  L  Y WPGNVREL+N+++R ++MS+   +    L+
Sbjct: 322 KHFLQEYSKEYNAQARSFSDDAVRGLTRYHWPGNVRELMNQIKRVVLMSDTVVLDESQLD 381

Query: 386 LAEYVEIVPVSLAQAREAAERQAIELALLRHRGRLGDAAQELGISRVTLYRLLCSHGM 443
           L +  +    SL   RE +ER A+ L L  H G++  AA+ELG+SR T+YRLL  H +
Sbjct: 382 LPKRSD-GRRSLKSIRERSERDALLLVLESHSGQVSTAAKELGVSRATMYRLLNKHNL 438