Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  254 bits (649), Expect = 4e-72
 Identities = 165/363 (45%), Positives = 213/363 (58%), Gaps = 25/363 (6%)

Query: 96  VRDYCFDYVTVPYSGDRIVDSVGHAY-------GMVSLGEPASNDASQGGSEGEMVGSCD 148
           ++D  FDYV  P+  + I   V  A         +VSL    S    + G+EG +  +  
Sbjct: 96  IKDGAFDYVIKPFDLEEIRLLVRRALEIRSMRADIVSLRRELSE---RYGAEGILTDN-P 151

Query: 149 AMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPPHLL 208
            M+ L ++I KVA + A V I GESGTGKEL A ++H  S R   PFI +NC AIP  LL
Sbjct: 152 KMMDLRQTIAKVARSQATVLIQGESGTGKELVAASVHYGSPRATGPFIRVNCAAIPEGLL 211

Query: 209 QSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVERLG 268
           +SE FG+E+GAFTGA  R+ GR E A  GTLFLDEIG++    Q  LLR LQER+ ER+G
Sbjct: 212 ESEFFGHEKGAFTGAATRRRGRFEQAEHGTLFLDEIGEISPALQVKLLRVLQEREYERVG 271

Query: 269 GHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLARHM 328
           G   I  DVRI++AT+ D+   + EG FR DL+ RL V+ +   PLR R +DI LLA H 
Sbjct: 272 GSEPIPADVRIVAATNRDLEAMIREGTFRQDLFFRLNVVALKTIPLRDRPEDIRLLADHF 331

Query: 329 LERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARDL---- 384
           L RF  D +  +RGF P A+  +  Y WPGNVREL+N V RA+VMS G  I   DL    
Sbjct: 332 LGRFAADNNVVIRGFDPAALDCMLAYPWPGNVRELVNAVERAVVMSTGNVILRDDLPENI 391

Query: 385 ---ELAEYV-EIVP--VSLAQAREAA---ERQAIELALLRHRGRLGDAAQELGIS-RVTL 434
              E A +V E++P   ++   RE A   E + I LAL R+ G     A +LGIS R  L
Sbjct: 392 ICGERAAFVSELLPDGEAIRPLREMASEFETRVIRLALARNGGNRARTAIQLGISRRALL 451

Query: 435 YRL 437
           Y+L
Sbjct: 452 YKL 454