Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 486 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  261 bits (668), Expect = 3e-74
 Identities = 166/392 (42%), Positives = 229/392 (58%), Gaps = 47/392 (11%)

Query: 101 FDYVTVPYSGDRIVDSVGHAY----------GMVSLGEPASNDASQGGSEGEMVGSCDAM 150
           FDY+  P+    I+  +  A            MV+ G+  +   + G +   +VG+  AM
Sbjct: 97  FDYILKPFEIPDILALIEQAVEAGRRMRARVDMVADGDDGTGQETLGEA---LVGTSRAM 153

Query: 151 LALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPPHLLQS 210
             ++++I + A TDA V + GESGTGKEL A A+++ S R   PF+ INC AIP  LL+S
Sbjct: 154 HQVYKAIGRAAPTDALVLVRGESGTGKELVARAVYQHSLRGEKPFLIINCVAIPDTLLES 213

Query: 211 ELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVERLGGH 270
           ELFGYE+GAFTGA  R++G++E ANGGT+FLDEIGD+PL  QA LLR LQE+++ERLGG 
Sbjct: 214 ELFGYEKGAFTGATNRRVGKIEQANGGTVFLDEIGDMPLGIQAKLLRLLQEKQIERLGGR 273

Query: 271 GSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLARHMLE 330
             I VDVRII+AT+ D+  A+ +GRFR DLY+RL V+ +  PPLR R +DI  LAR+ L 
Sbjct: 274 QPIPVDVRIIAATNTDLEAAVADGRFREDLYYRLKVVTLWLPPLRERSEDIPPLARYFLA 333

Query: 331 RFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARDLELAEYV 390
           RF ++      G  P+A+A L    WPGNVREL N V +A+V S G  +   DL+ A   
Sbjct: 334 RFSREMDMPNPGITPEALAYLEAQPWPGNVRELGNSVHKALVFSRGGPLGEPDLKQALEA 393

Query: 391 E--IVPVSLAQARE---AAERQAIEL---------------ALLRHRGRL---------- 420
              + P S   A +   AA++   EL               +L+ H GRL          
Sbjct: 394 SRGVRPGSEGPACDLSLAADQTMQELIRRTLSESDGDNVFDSLMDHVGRLVVREALHLTG 453

Query: 421 ---GDAAQELGISRVTLYRLLCSHGMRHMETE 449
                AA+ LG+SR TL   +  +G+R +ET+
Sbjct: 454 GNRTRAARLLGLSRPTLLAKIEKYGLR-IETQ 484