Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 453 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  304 bits (779), Expect = 3e-87
 Identities = 167/377 (44%), Positives = 234/377 (62%), Gaps = 9/377 (2%)

Query: 74  PNVGWVATTMAGQLQDAALRRLVRDYCFDYVTVPYSGDRIVDSVGHAYGMVSLGEPASND 133
           P V  +  T    +++A   R ++   +D+   P   D +   +G A+ +  L +     
Sbjct: 77  PRVQVIVVTGHHDVENAL--RAIQGGAYDFCHKPADLDVLKIIIGRAFFLHGLRDNVGPP 134

Query: 134 ASQGGSEGEMVGSCDAMLALFRSIRKVAMTDAPVFISGESGTGKELTAVAIHERSSRRNA 193
             + G    +VG C AMLA+F +I KVA +D PV ++GESGTGKEL A AIH  S R + 
Sbjct: 135 VKRQGECQGIVGQCPAMLAVFETISKVASSDVPVLVTGESGTGKELVARAIHAFSHRTSM 194

Query: 194 PFIPINCGAIPPHLLQSELFGYERGAFTGANQRKIGRVEAANGGTLFLDEIGDLPLESQA 253
           PF+ INCGAIP +LL++E FGYE+GAFTGA QR  G+VE A+ GTLFLDEIG+LP   Q 
Sbjct: 195 PFVAINCGAIPDNLLEAEFFGYEKGAFTGATQRVQGKVEYADSGTLFLDEIGELPPNLQV 254

Query: 254 SLLRFLQERKVERLGGHGSIEVDVRIISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPP 313
            LLRFLQE  ++R+GG   I VD RI++AT+ D+ + +  GRFR DLY+R+ V+ I  PP
Sbjct: 255 KLLRFLQEMVIQRVGGRKDIRVDARIVAATNRDIQSEIASGRFREDLYYRIGVVPIVLPP 314

Query: 314 LRARGKDIELLARHMLERFRKDASRRLRGFAPDAIAALHNYSWPGNVRELINRVRRAIVM 373
           LR RG DI LLARH LERF ++ + +++  +P A  A+  ++WPGNVREL N+VRRA++ 
Sbjct: 315 LRTRGDDILLLARHFLERFARERNHQVKMLSPAATQAMLRHNWPGNVRELENKVRRAVIF 374

Query: 374 SEGRAITARDLELAEYVEI-------VPVSLAQAREAAERQAIELALLRHRGRLGDAAQE 426
           + G+ I   DL   + +            +L +AR A ER  +  AL +  G +  A+Q 
Sbjct: 375 ASGQHIAPADLGFDDAMPADAPAPPRAEGTLKEARNALERDIVLTALEKCSGNIVQASQA 434

Query: 427 LGISRVTLYRLLCSHGM 443
           +G+SR T Y LL  HG+
Sbjct: 435 IGVSRPTFYDLLRKHGI 451