Pairwise Alignments

Query, 464 a.a., sigma-54 dependent transcriptional regulator from Paraburkholderia sabiae LMG 24235

Subject, 440 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Marinobacter adhaerens HP15

 Score =  291 bits (745), Expect = 3e-83
 Identities = 161/353 (45%), Positives = 221/353 (62%), Gaps = 4/353 (1%)

Query: 102 DYVTVPYSGDRIVDSVGHAYGMVSLGEPASNDASQGGSEG--EMVGSCDAMLALFRSIRK 159
           D+   P   D +   V  A+ +  L       A+Q  +     +V +   ML + R++ K
Sbjct: 86  DFYQKPLDADILTFVVDRAFRLYELERENRELANQQNATNIKGIVAASPQMLQVCRTLEK 145

Query: 160 VAMTDAPVFISGESGTGKELTAVAIHERSSRRNAPFIPINCGAIPPHLLQSELFGYERGA 219
           +A TD    I+GE+GTGKEL A A+H+ S R + PF  INC AIP  LL+SELFGYE+GA
Sbjct: 146 IAPTDVTTLINGETGTGKELLARALHDLSPRASKPFAAINCAAIPEALLESELFGYEKGA 205

Query: 220 FTGANQRKIGRVEAANGGTLFLDEIGDLPLESQASLLRFLQERKVERLGGHGSIEVDVRI 279
           FTGA Q K G++E+ANGGTLFLDEIGD+P   QA LLRFLQER ++R+G    I VDVR+
Sbjct: 206 FTGATQNKKGKIESANGGTLFLDEIGDMPFALQAKLLRFLQERMIDRVGAIEPISVDVRV 265

Query: 280 ISATHVDMNTAMIEGRFRSDLYHRLCVLQIDEPPLRARGKDIELLARHMLERFRKDASRR 339
           I ATH ++N  +  G FR DLY+R+  + +D P LR R  D  +LA+ +L+   K+  R 
Sbjct: 266 ICATHRNLNQLIEGGEFREDLYYRISEITLDVPALRDRDGDALVLAQSLLKSIGKELDRP 325

Query: 340 LRGFAPDAIAALHNYSWPGNVRELINRVRRAIVMSEGRAITARDLEL--AEYVEIVPVSL 397
              FA DAI+A++NY WPGNVRE+IN+V+RAI+M+EG+ +TA DL L      +   ++L
Sbjct: 326 NLSFAEDAISAVNNYPWPGNVREMINKVKRAIIMAEGKRVTAEDLSLQATSTQDEKCLNL 385

Query: 398 AQAREAAERQAIELALLRHRGRLGDAAQELGISRVTLYRLLCSHGMRHMETEP 450
            Q RE AER+A+  AL      +  AA+ LGI+R T+Y L   + +   E  P
Sbjct: 386 RQIRETAERRALNQALQVSGFNMARAARLLGITRPTIYSLTDKYNIETSEASP 438