Pairwise Alignments

Query, 875 a.a., DNA gyrase subunit A from Paraburkholderia sabiae LMG 24235

Subject, 901 a.a., DNA gyrase subunit A (RefSeq) from Shewanella amazonensis SB2B

 Score = 1025 bits (2650), Expect = 0.0
 Identities = 521/912 (57%), Positives = 668/912 (73%), Gaps = 51/912 (5%)

Query: 1   MDQFAKETLPISLEEEMRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
           M   A    PI++E+E++ SY++YAMSVIVGRALPDVRDGLKPVHRRVL+AM+EL NDWN
Sbjct: 1   MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN 60

Query: 61  RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
           + YKKSAR+VGDVIGKYHPHGDSAVYDTIVRMAQ FSLRY LVDGQGNFGS+DGD AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM 120

Query: 121 RYTEIRMAKIGHELLADIDKETVDFQPNYDGSENEPSILPARIPNLLINGSSGIAVGMAT 180
           RYTEIRM K+ HELLAD++KETVDF PNYDG+E  P++LP +IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEIRMEKLAHELLADLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT 180

Query: 181 NIPPHNLNEIVDACHHLLKNPEATIDELIEIVPAPDFPTAGIIYGVQGVRDGYRTGRGRV 240
           NIPPHNL E+V  C  L++ PE +I++L+E +P PDFPTA II G +G+ + YRTGRG+ 
Sbjct: 181 NIPPHNLTEVVKGCLALIEEPELSIEQLMEYIPGPDFPTAAIINGKKGIEEAYRTGRGKA 240

Query: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
           +MRA    E  D G R  IIV E+PYQVNK  L+E+IAELV +KK+EGIS +RDESDK G
Sbjct: 241 IMRARAEVEIEDNG-RERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDG 299

Query: 301 MRVVIELKRGEVPEVILNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRRE 360
           MR+VIE+KRGEV EV+LNNLY  TQ+Q +FG+NMVAL +GQPKL NLKEML  F+ HRRE
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQSSFGINMVALANGQPKLFNLKEMLEAFILHRRE 359

Query: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRSWDSSIV 420
           V+TRRTVYELRKAR+R H+LE LAVALANID  IA+IKA+ +P  AK  L+ + W+   V
Sbjct: 360 VVTRRTVYELRKARDRAHILEALAVALANIDPIIALIKASASPSDAKAGLIAKGWELGTV 419

Query: 421 REMLQRAEADNATSGGRAAYRPEGLNPAYGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
           + ML++A        G  A RPE L P +G++ DGLY +++ QAQ IL +RL +LTGLE 
Sbjct: 420 KAMLEKA--------GDDAARPEWLEPEFGIR-DGLYFMTEPQAQAILDLRLHKLTGLEH 470

Query: 481 DKIIGEYRDVMAQIADLLDILARPERITSIIFDELVTIKSEFGDERRSKIEMNATELNTE 540
           +KI+ EY +++  IA LL IL  PER+  +I +EL  I  +FGD RR++I  +A +++ E
Sbjct: 471 EKILQEYEELLEIIAGLLHILRSPERLMEVIKEELELILEQFGDNRRTEINASAVDISLE 530

Query: 541 DLITPQDMVVTMSHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHIL 600
           DLI  +D+VVT+SH GY K QPL++Y+AQ+RGG+GK AT++K++D+++ L +ANTHD IL
Sbjct: 531 DLINEEDVVVTLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTIL 590

Query: 601 CFSNRGRVYWLKVYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPVKEFSADKFVFMATA 660
           CFS+ G++YWLKVY++P  SR +RGRPIVN+ PLQEGE+IT +LPV+E+   K++ MAT+
Sbjct: 591 CFSDFGKLYWLKVYQLPLASRQARGRPIVNLLPLQEGERITAILPVREYEEGKYILMATS 650

Query: 661 LGTVKKTPLEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKAVRFDEND- 719
            GTVKKT L  +SRP   GIIAV L DGD LIG  ITDG  ++MLFSD+GK VRF E + 
Sbjct: 651 HGTVKKTALTEYSRPRSNGIIAVNLKDGDQLIGVDITDGSSEIMLFSDAGKVVRFKEGEE 710

Query: 720 ------------------------VRPMGREARGVRGMQLEDGQSVIALLVAGDEQQSVL 755
                                   VRPMGR A GVRG+ LE+GQ V++L+V  D+  ++L
Sbjct: 711 VAVVDENGNPVLDEEGKPQINFKGVRPMGRGATGVRGIALEEGQRVVSLIVPKDD-SAIL 769

Query: 756 TATENGYGKRTPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDPEAQIMLITNTGVLI 815
           T T NG+GKRT + EY    R TKG+++I+ +ERNG VV A  V    +IMLI++ G L+
Sbjct: 770 TVTANGFGKRTELAEYPAKSRATKGVVSIKVTERNGPVVGAVQVGENDEIMLISDKGTLV 829

Query: 816 RTRVSEIREMGRATQGVTLISLDEGTKLSGLQQIAE---------------AEADVDGDA 860
           RT    +  +GR TQGVT+I   +   + GLQ+I E               AE D+  +A
Sbjct: 830 RTPAIGVSIIGRNTQGVTIIRTADDETVVGLQRIDEIQDDGSEYLEEGVEGAEGDIIAEA 889

Query: 861 DLPADEAGGDES 872
           D    +   DE+
Sbjct: 890 DTQPTDDANDEA 901