Pairwise Alignments

Query, 875 a.a., DNA gyrase subunit A from Paraburkholderia sabiae LMG 24235

Subject, 918 a.a., DNA gyrase subunit A (RefSeq) from Shewanella sp. ANA-3

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 531/894 (59%), Positives = 671/894 (75%), Gaps = 41/894 (4%)

Query: 1   MDQFAKETLPISLEEEMRRSYIEYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN 60
           M   A    PI++E+E++ SY++YAMSVIVGRALPDVRDGLKPVHRRVL+AM EL NDWN
Sbjct: 1   MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN 60

Query: 61  RAYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM 120
           + YKKSAR+VGDVIGKYHPHGDSAVYDTIVRMAQ FSLRY LVDGQGNFGSVDGD+AAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM 120

Query: 121 RYTEIRMAKIGHELLADIDKETVDFQPNYDGSENEPSILPARIPNLLINGSSGIAVGMAT 180
           RYTEIRM K+ H+LLAD++KETVD+ PNYDG+E  P++LP R+PNLLINGSSGIAVGMAT
Sbjct: 121 RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT 180

Query: 181 NIPPHNLNEIVDACHHLLKNPEATIDELIEIVPAPDFPTAGIIYGVQGVRDGYRTGRGRV 240
           NIPPHNL E+V  C  L+ +P  +I++L+E +P PDFPTA II G +G+ D Y+TGRGR 
Sbjct: 181 NIPPHNLTEVVKGCLALIADPALSIEQLMEHIPGPDFPTAAIINGRKGIIDAYKTGRGRA 240

Query: 241 VMRATTHFEEIDRGQRMAIIVDELPYQVNKRSLLERIAELVNEKKLEGISDIRDESDKSG 300
           VMRA    E  D G R  IIV E+PYQVNK  L+E+IAELV +KK+EGIS +RDESDK G
Sbjct: 241 VMRALAEVETEDNG-RERIIVTEIPYQVNKAKLIEKIAELVKDKKIEGISGLRDESDKDG 299

Query: 301 MRVVIELKRGEVPEVILNNLYKATQLQDTFGMNMVALVDGQPKLLNLKEMLSHFLSHRRE 360
           MR+VIE+KRGEV EV+LNNLY  TQ+Q +FG+NMVAL +GQPKL NLKEML  F+ HRRE
Sbjct: 300 MRIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRRE 359

Query: 361 VLTRRTVYELRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPIAKQELMDRSWDSSIV 420
           V+TRRTV+ELRKARER H+LE LAVALANID  IA+IKA+PTP  AK +L+++ W    V
Sbjct: 360 VVTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWALGHV 419

Query: 421 REMLQRAEADNATSGGRAAYRPEGLNPAYGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQ 480
           + ML++A        G  A RPE L P +G++ DGLY L++ QAQ IL++RL RLTGLE 
Sbjct: 420 QGMLEKA--------GDDAARPEWLEPEFGIR-DGLYYLTEQQAQAILELRLHRLTGLEH 470

Query: 481 DKIIGEYRDVMAQIADLLDILARPERITSIIFDELVTIKSEFGDERRSKIEMNATELNTE 540
           DKII EY +++  IA LL IL  PER+  +I +EL  I +E+GD RR+ I  N  +++ E
Sbjct: 471 DKIIAEYEELLEFIAGLLFILRSPERLMEVIKEELEEILAEYGDARRTVINANEIDMSLE 530

Query: 541 DLITPQDMVVTMSHSGYVKSQPLSEYRAQKRGGRGKQATQMKEDDWIDTLFIANTHDHIL 600
           DLI  +D+VVT+SH GY K QPLS+Y+AQ+RGG+GK AT++K++D+++ L +ANTHD IL
Sbjct: 531 DLINEEDVVVTLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTIL 590

Query: 601 CFSNRGRVYWLKVYEVPQGSRNSRGRPIVNMFPLQEGEKITVVLPVKEFSADKFVFMATA 660
           CFS+ G++YWLKVY++P  SR SRGRPIVN+ PL +GE+IT +LPV+E++ DK++ MAT+
Sbjct: 591 CFSDFGKMYWLKVYQLPLASRTSRGRPIVNLLPLSDGERITAILPVREYAEDKYIIMATS 650

Query: 661 LGTVKKTPLEAFSRPLKKGIIAVGLDDGDYLIGAAITDGEHDVMLFSDSGKAVRFDEND- 719
            GTVKKT L A+S P   GIIAV L DGD LIG  IT+G+ ++MLFS+ GK VRF E + 
Sbjct: 651 NGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFKEGEE 710

Query: 720 ------------------------VRPMGREARGVRGMQLEDGQSVIALLV-AGDEQQSV 754
                                   VRPMGR A GVRG++LE+GQ V++L+V  GD   ++
Sbjct: 711 VAVLDENGNAVLDEEGNPQINFKGVRPMGRGATGVRGIKLEEGQRVVSLIVPKGD--GAI 768

Query: 755 LTATENGYGKRTPITEYTRHGRGTKGMIAIQTSERNGKVVAATLVDPEAQIMLITNTGVL 814
           LT TENGYGKRT ++EY    R TKG+++I+ SERNG VV A  V    +IMLI++ G L
Sbjct: 769 LTVTENGYGKRTELSEYPSKSRATKGVVSIKVSERNGAVVGAVQVGGNDEIMLISDKGTL 828

Query: 815 IRTRVSEIREMGRATQGVTLISLDEGTKLSGLQQIAEAEADVDGDADLPADEAG 868
           +RT  + +  +GR TQGVT+I      K+ GLQ+I E + D D   ++  DE G
Sbjct: 829 VRTPANGVSIIGRNTQGVTIIRTASDEKVVGLQRIDEIQGDED---EVELDENG 879