Pairwise Alignments

Query, 518 a.a., formate dehydrogenase beta subunit from Paraburkholderia sabiae LMG 24235

Subject, 461 a.a., NADH dehydrogenase I, F subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  275 bits (704), Expect = 2e-78
 Identities = 162/423 (38%), Positives = 229/423 (54%), Gaps = 5/423 (1%)

Query: 90  GVVDEIPYLKKQQRLTFARIGITDPLSTDDYIANGGIVGLYNALA-MTGDAAVEALIESG 148
           G  +  P   +   LT+       P+  ++Y    G   +  AL  M+ D  V  + ++G
Sbjct: 13  GTANRTPRAAETHPLTWRLRDDGQPVWLEEYQTKQGYDAVRKALGQMSPDEIVSTVKDAG 72

Query: 149 LRGRGGAAFPAGIKWRTV-RAAKADQKYIVCNADEGDSGTFSDRLVMESDPFVLIEGMII 207
           L+GRGGA FP G+KW  + +    + +Y++CNADE +  T+ DRL+ME  P +LIEGMII
Sbjct: 73  LKGRGGAGFPTGVKWGLMPKDESMNIRYLLCNADEMEPNTWKDRLLMEQLPHLLIEGMII 132

Query: 208 AGIVTGATVGHIYVRSEYPHSIATLEAAIVKARAAGWLGDSVLGSEHRFELFVAKGAGAY 267
           +     A  G+I++R EY  +   L  A+ +A+AAG LG ++LGS   FELFV  GAG Y
Sbjct: 133 SAKALKAYRGYIFLRGEYVDAAINLRRAVEEAKAAGLLGKNILGSGFDFELFVHTGAGRY 192

Query: 268 VCGEETALLESLEGKRGIVRAKPPLPALEGLFGKPTVINNVITLATVPIIFAKGAAFYKD 327
           +CGEETAL+ SLEG+R   RAKPP PA+ G++GKPT +NNV TL  VP I   G A+Y  
Sbjct: 193 ICGEETALINSLEGRRANPRAKPPFPAVSGVWGKPTCVNNVETLCNVPAIIGNGVAWYHT 252

Query: 328 FGM--GRSRGTLPFQIAGNVKQGGLVELAFGCTLRELMFDYGGGTASGRPARAVQVGGPL 385
             +      GT     +G V   G+ EL FG T REL   Y GG  SG   +A Q GG  
Sbjct: 253 LALPGSEDHGTKLMGFSGKVNNPGVWELPFGITARELFEGYAGGMRSGYRLKAWQPGGAG 312

Query: 386 GTYLPESQWDIPLDYEEYAKVGAVVGHGGLVIHDDTSNLADLAQYAMHFCALESCGKCTP 445
             +L     D  +      KVG  +G G  +  DD+ ++  L +    F A ESCG CTP
Sbjct: 313 TGFLLPEHLDAQMYTAGIGKVGTRMGTGLAMAVDDSISMVSLLRNMEEFFARESCGWCTP 372

Query: 446 CRIGSTRGVEVIQRIRNGDTSTKQVQLLRDLCDTMVSG-SLCAMGGMTPFPVVSALDHFP 504
           CR G    V++++ +  G+     +  L  LC+ +  G + CA       P+ SA+ +F 
Sbjct: 373 CRDGLPWSVKLLRSLERGEGQEGDLATLEQLCNFLGPGKTFCAHAPGAVEPLASAIKYFR 432

Query: 505 EDF 507
            +F
Sbjct: 433 SEF 435