Pairwise Alignments

Query, 145 a.a., transcription antitermination factor NusB from Paraburkholderia sabiae LMG 24235

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella amazonensis SB2B

 Score =  124 bits (310), Expect = 7e-34
 Identities = 59/130 (45%), Positives = 85/130 (65%)

Query: 3   SARRRSRELATQGLYQWLLSGSPAGEIDAQLRGAQGYDKADHEHLDAILHGVIRDSEALS 62
           S RR++R LA Q +Y W LSG+   +++ +    Q  D  D  +   +  G    +  L 
Sbjct: 4   SERRKARRLAVQAIYSWQLSGNNVADVEHEFLTEQELDGVDVAYFRELFAGAATKTAQLD 63

Query: 63  ADLAPCLDRPIDQLSPVERAVLLVAAYELKNHIDIPYRVVINEAVELAKTFGGADGYKYV 122
             L P LDRP++++SPVE+A+L +A YEL    D+PY+VVINEA+ELAK+FG  DG+K+V
Sbjct: 64  EKLKPLLDRPLEEVSPVEKAILRLAVYELTFRKDVPYKVVINEAIELAKSFGAEDGHKFV 123

Query: 123 NGVLDKLSAK 132
           NG+LDKL A+
Sbjct: 124 NGILDKLVAR 133