Pairwise Alignments

Query, 145 a.a., transcription antitermination factor NusB from Paraburkholderia sabiae LMG 24235

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella sp. ANA-3

 Score =  116 bits (290), Expect = 1e-31
 Identities = 57/130 (43%), Positives = 82/130 (63%)

Query: 3   SARRRSRELATQGLYQWLLSGSPAGEIDAQLRGAQGYDKADHEHLDAILHGVIRDSEALS 62
           S RR++R LA Q +Y W LSG+   +++ +    Q  D  D  +   +  GV      L 
Sbjct: 4   SERRKARRLAVQAIYSWQLSGNNIADVEHEFLTEQSLDGVDVAYFRELFAGVATKKTQLD 63

Query: 63  ADLAPCLDRPIDQLSPVERAVLLVAAYELKNHIDIPYRVVINEAVELAKTFGGADGYKYV 122
               P LDRPID++SPVE+A++ +AAYEL    D+P++V INEA+ELAK FG  + +K+V
Sbjct: 64  ELFIPHLDRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINEAIELAKAFGADESHKFV 123

Query: 123 NGVLDKLSAK 132
           NG+LDKL A+
Sbjct: 124 NGLLDKLVAR 133