Pairwise Alignments

Query, 145 a.a., transcription antitermination factor NusB from Paraburkholderia sabiae LMG 24235

Subject, 429 a.a., sun protein (RefSeq) from Shewanella sp. ANA-3

 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 9   RELATQGLYQWLLSGSPAGEI--DAQLRGAQGYDKADHEHLDAILHGVIRDSEALSADLA 66
           R LA + +++ L  G        + Q   A G DKA    L  + +GV+R    +   +A
Sbjct: 5   RALAAKAIFEVLEKGVSLSVALPEQQKHLASGKDKA---LLAELCYGVMRTLPQIEKRVA 61

Query: 67  PCLDRPIDQLSPVERAVLLVAAYELKNHIDIPYRVVINEAVELAKTFGGADGYKYVNGVL 126
            CL +P+     +   +L+V  Y+L     IP    I+E  E  +        K VNGVL
Sbjct: 62  ECLAKPLKGKQRIIHQLLIVGCYQL-YFTRIPSHAAISETAEACRQLKFEGMVKVVNGVL 120

Query: 127 DKLSAKLRVDETQA 140
             +  +L    T++
Sbjct: 121 RNIQRQLTPLSTES 134