Pairwise Alignments

Query, 273 a.a., helical backbone metal receptor from Paraburkholderia sabiae LMG 24235

Subject, 274 a.a., periplasmic binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 22/262 (8%)

Query: 14  ATAEPGARIVSLVPSLTELLFALKLDAQIVGRTGFCVHPRDKVRNVPKVGGTKAVKIDAV 73
           A AEP  RI++L P   E+L+A+     IV  T +  +P +  + +P +GG   ++I+ V
Sbjct: 20  AMAEPAKRIIALSPHAVEMLYAIGAGESIVAATDYADYP-EAAKKIPSIGGYYGIQIERV 78

Query: 74  RALQPTHVIVNIDENERDTVEQMRAFVPHVVVTHPLEPRDNLALYALLGALFDRGQEARE 133
             L P  ++V    N+ + + Q++     +  + P    D       LG L    ++A  
Sbjct: 79  LELNPDLIVVWDTGNKAEDINQLKNLGFKLYSSSPKTLEDVAKEIEELGELTGHTEQASR 138

Query: 134 LSAALERQL------NACTSREWPTQNVLYAIWREPWMTVARDTYISAMLRLVNWHTLPD 187
           ++A    +L      NA  S       V Y +W  P MTVA++++I  ++ +        
Sbjct: 139 VAADYRSELLRLRSENAAKSE----PKVFYQLWSTPLMTVAKNSWIQQIIGV-------- 186

Query: 188 VHGGE---KGAARYPSFDLDAAWLAQADRVLLSSEPYRFTQQHCDALSQDARLKNKRVEL 244
            HG       A+ YP   L+   L   + +L S E            ++   +KN+ +  
Sbjct: 187 CHGKNVFYDAASDYPQVSLENVLLTLPEVILQSEEEGNVKGVDWSQWAEIPAVKNQHIYQ 246

Query: 245 IDGEMVSWYGSRAIDGIAYLVD 266
           ++ +++     RA+ G+  + D
Sbjct: 247 LNADLLHRATPRALLGVKAVCD 268