Pairwise Alignments

Query, 470 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 482 a.a., outer membrane efflux protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 75/323 (23%), Positives = 135/323 (41%), Gaps = 29/323 (8%)

Query: 147 LGKIRTGVKIAQTDVKIAEAKAAQAAQEVKQGVEQLFYGLLLAQKQQEEAQANIQLTEAK 206
           L K R  + +   +  +A  K+ +  +  +  + +L          +E+A+    +T A 
Sbjct: 172 LDKSRLDLAVQVQEAFLAHLKSGENVRSARDALSRL----------REQAK----VTRA- 216

Query: 207 LYDVESALLAGKTDEVNKIGLQAALADEQQKLLVIQHQVADYTYDLNQLLGLPTDTGLRL 266
            YDV      G    ++ +  +  + + +  L+  ++  A     LN LL LP D+    
Sbjct: 217 FYDV------GLRPRLDVLQAEVDVTNAESLLITAENNHATQRARLNTLLTLPVDSDTAY 270

Query: 267 DGVQEEEVPLQPLEEYLQLAQTVSYDVRIAEHTSQKAAYGVNAAKKDYIPNVNA------ 320
            G          LE+ L+ A     DVRIA    + A   V  A     P V+A      
Sbjct: 271 VGTLVPVGFDMTLEQCLERAYRNRPDVRIAGKAVEIAGKDVRIADSGLYPQVSANFNWAT 330

Query: 321 IGGYTHQSILNVLPE--NNYFFGVQANWNIIDFGRRKAVLKQRQSQQRQAELNLENTRED 378
            G +   S   + P   + +  G++A W++ ++G+     +Q +  + Q      N R +
Sbjct: 331 EGDHPEASGSTLSPNGFSQWSTGLKAEWSVFEWGKTWYSGQQARQVETQVRAEEANLRHE 390

Query: 379 VTGRVEQAYRKVQQARQLVAVARQAVQYREQELKLKQDRFDAGLILKKDVLESQAALAKS 438
           V   V+     +  + + +AVA + +   E+  ++   R+ A +    DVL++QA L  +
Sbjct: 391 VAYEVQSRLLTLTDSSKRIAVATKGLVQAEEAYRVAVARYQAQVGTNTDVLDAQAKLTAA 450

Query: 439 EADLYAARLGYRLALSDLQAMTG 461
           EA L  A+  Y  ALS L A  G
Sbjct: 451 EAALTGAKAEYLDALSKLWAAMG 473



 Score = 40.4 bits (93), Expect = 1e-07
 Identities = 32/148 (21%), Positives = 71/148 (47%), Gaps = 5/148 (3%)

Query: 303 AAYGVNAAKKDYIPNVNAIGGYTH-----QSILNVLPENNYFFGVQANWNIIDFGRRKAV 357
           A  G  +A+  + P V+   GY       +S+   L ++ Y + V  +  +    R  + 
Sbjct: 98  AEEGRKSARGAFGPAVSTSYGYNRLNEKPRSMSRELDDDTYTWTVGVSQPLFTGLRLLST 157

Query: 358 LKQRQSQQRQAELNLENTREDVTGRVEQAYRKVQQARQLVAVARQAVQYREQELKLKQDR 417
            ++   +  +  L L+ +R D+  +V++A+    ++ + V  AR A+    ++ K+ +  
Sbjct: 158 YQKAALETERKSLTLDKSRLDLAVQVQEAFLAHLKSGENVRSARDALSRLREQAKVTRAF 217

Query: 418 FDAGLILKKDVLESQAALAKSEADLYAA 445
           +D GL  + DVL+++  +  +E+ L  A
Sbjct: 218 YDVGLRPRLDVLQAEVDVTNAESLLITA 245



 Score = 24.3 bits (51), Expect = 0.010
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 46  LSLQEAQDLALEQNRLLRIAREQVEESEQKVKEAQSRQYPLVYATGGYTYNG 97
           ++L++  + A      +RIA + VE + + V+ A S  YP V A   +   G
Sbjct: 281 MTLEQCLERAYRNRPDVRIAGKAVEIAGKDVRIADSGLYPQVSANFNWATEG 332