Pairwise Alignments

Query, 470 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 538 a.a., RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 62.0 bits (149), Expect = 5e-14
 Identities = 54/195 (27%), Positives = 81/195 (41%), Gaps = 7/195 (3%)

Query: 279 LEEYLQLAQTVSYDVRIAEHTSQKAAYGVNAAKKDYIPNVNAIGGYTH-------QSILN 331
           L+  L  A T ++DVRIA    ++A      A     P V      T             
Sbjct: 105 LDRLLARAATANFDVRIAAEKVREARAAAREAGASLGPTVTGSASGTRIRSGTGEAQSSG 164

Query: 332 VLPENNYFFGVQANWNIIDFGRRKAVLKQRQSQQRQAELNLENTREDVTGRVEQAYRKVQ 391
               N Y  G+   W I  FGR +A  + R +  + AE +  +T   +   V   Y  ++
Sbjct: 165 SRDGNVYATGLDMAWEIDLFGRLRATREARVADAQAAEEDRRDTLVTLLAEVATQYVTLR 224

Query: 392 QARQLVAVARQAVQYREQELKLKQDRFDAGLILKKDVLESQAALAKSEADLYAARLGYRL 451
           QA+  +A+ R     R + L L  DR DAGL    DV ++ A    ++AD          
Sbjct: 225 QAQNELALTRDIAASRAETLALVTDRRDAGLAGDIDVAQAAALWHAAQADAAEYENNAWA 284

Query: 452 ALSDLQAMTGASAQE 466
           AL+ L+ +TGA+  E
Sbjct: 285 ALARLERLTGAAPGE 299



 Score = 33.9 bits (76), Expect = 1e-05
 Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 11/160 (6%)

Query: 292 DVRIAEHTSQKAAYGVNAAKKDYIP--NVNAIGGYTHQSILNVLPENNYFFGVQA--NWN 347
           D+R AE T   AA  + A   +  P  +++A  G    ++  +L   +  + V       
Sbjct: 331 DIRAAERTLASAASDLAATTAERWPTLSLSATLGSQASTVNRLLSSGSGVWSVAPALGLT 390

Query: 348 IIDFGRRKAVLKQRQSQQRQAELNLENTREDVTGRVEQAYRKVQQARQLVAVARQAVQYR 407
           + D G   A ++Q  +++ Q  L   +T        E A   V + ++ +      ++  
Sbjct: 391 LFDSGATTARIEQADARREQTALAYLSTARTAVEEAETALYAVDRQQRRLPDLAAVLEAD 450

Query: 408 EQELKLKQDRFDAGLILKKDVLESQAALAKSEADLYAARL 447
              L L QDR+ AGL    D L    A+A +E +L  A L
Sbjct: 451 RTALVLAQDRYRAGL---TDFL----AVADAERELSTAAL 483