Pairwise Alignments

Query, 371 a.a., carbamoyl phosphate synthase small subunit from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 390 a.a., carbamoyl phosphate synthase small subunit (RefSeq) from Shewanella loihica PV-4

 Score =  315 bits (808), Expect = 1e-90
 Identities = 167/380 (43%), Positives = 232/380 (61%), Gaps = 19/380 (5%)

Query: 6   SSEAILLLEDGTVYKGKSLGRIGTSGGELCFNTGMTGYQEIFTDPSYYGQLVVTTVSHVG 65
           +  A+L+LEDGTV+ G ++G  G + GE+ FNT MTGYQEI TDPSY  Q+V  T  H+G
Sbjct: 11  TKSALLVLEDGTVFSGTAIGADGLAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIG 70

Query: 66  NYGVQHQEVESGKVQISGLVCKEFSHHFSRKTAEGSLQDYFEKAGVVGICEIDTRALVRH 125
           N G   ++ ES  V   GL+ ++     S    E SL DY +   VVGI +IDTR L R 
Sbjct: 71  NTGTNSEDTESEAVHACGLIIRDLPLLASNFRNEQSLSDYLKSNNVVGIADIDTRKLTRI 130

Query: 126 IRDKGAM-NAIVSSEITDVEQLRKMLAEVPSMDGLELSSHVSTPDEYHLK---------- 174
           +R+KGA   AI+  ++ + + L    A  P + G++L+  V+T  +Y  +          
Sbjct: 131 LREKGAQAGAILVGDMDEAKALAAAKA-FPGLKGMDLAKEVTTQKQYQWRSGSWRLVGGL 189

Query: 175 ----PE-EVKFRVAVLDLGVKRNSLNNFMQRGCEVKVFPYNTPFEEMEKWNPDGYFISNG 229
               PE E+K++V   D GVKRN L   + RGC+V V P  TP  E+   NPDG F+SNG
Sbjct: 190 PSDTPESELKYKVVAYDYGVKRNILRMLVDRGCDVTVVPAQTPAAEVLAMNPDGIFLSNG 249

Query: 230 PGDPAATKHAVQSVKQILERDRPMFGICMGHQILAQANGIATYKMHNGHRGLNQPVKNLL 289
           PGDP    +A+++++  L+ D P+FGIC+GHQ+LA A+G  T KM  GH G N PV NL 
Sbjct: 250 PGDPEPCDYAIEAIQAFLKTDIPLFGICLGHQLLALASGAKTLKMKFGHHGANHPVSNLE 309

Query: 290 TGKSEITSQNHGFVVDAEQLKNHPDVEITHINLNDNTVEGMRMRTKPAFSVQYHPESSPG 349
            G   ITSQNHGF  D   L    +V++TH +L D +++G+ +  KPAFS Q HPE+SPG
Sbjct: 310 KGNVMITSQNHGFAADETSLP--ANVKVTHKSLFDGSLQGIHLTDKPAFSFQGHPEASPG 367

Query: 350 PHDSTYLFDEFVALLEKSKN 369
           PHD+  LFD F+ L+E+ ++
Sbjct: 368 PHDAAPLFDHFIELIEEYRH 387