Pairwise Alignments

Query, 371 a.a., carbamoyl phosphate synthase small subunit from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 407 a.a., carbamoyl-phosphate synthase small subunit from Bifidobacterium breve UCC2003

 Score =  330 bits (846), Expect = 4e-95
 Identities = 171/389 (43%), Positives = 239/389 (61%), Gaps = 25/389 (6%)

Query: 4   HTSSEAILLLEDGTVYKGKSLGRIGTSGGELCFNTGMTGYQEIFTDPSYYGQLVVTTVSH 63
           +   +A+L+LEDG VY G+  G +G + GE+ F TGMTGYQE  TDPSY  Q+VV T  H
Sbjct: 14  YDKDDAVLVLEDGQVYVGEPYGALGETTGEIVFATGMTGYQETLTDPSYDRQIVVQTFPH 73

Query: 64  VGNYGVQHQEVESGKVQISGLVCKEFSHHFSRKTAEGSLQDYFEKAGVVGICEIDTRALV 123
           +G+ GV  ++ ES ++ ++G + ++ S + S   AEGSL D   K G+VG+  IDTR LV
Sbjct: 74  IGDTGVNSEDPESSRIWVAGYIVRDPSPNVSNWRAEGSLDDDLVKNGIVGLSHIDTRKLV 133

Query: 124 RHIRDKGAMNAIVSS----------EITDVEQLRKMLAEVPSMDGLELSSHVSTPDEYHL 173
           RH+R  G M A + S          ++  +EQL + +   P M GL L   VST + Y +
Sbjct: 134 RHLRSAGVMRAGIFSGEALVDAATGKLKTIEQLLEDVKNTPPMQGLSLYDEVSTKETYTI 193

Query: 174 KP------EEVKFRVAVLDLGVKRNSLNNFMQRGCEVKVFPYNTPFEEMEKWNPDGYFIS 227
           +P      +E  + VA +DLG+K  + +   +RGC V V P    F E+E  NPDG F S
Sbjct: 194 EPCGEYEGKEPLYTVAAVDLGIKGMTPHRMAERGCRVHVVPSTITFAELEALNPDGVFFS 253

Query: 228 NGPGDPAATKHAVQSVKQILERDRPMFGICMGHQILAQANGIATYKMHNGHRGLNQPVKN 287
           NGPGDP      ++ ++Q+L+   P FGIC G+Q+L +A G  TYK+  GHRG+NQPVK+
Sbjct: 254 NGPGDPEQAGPEIELLRQVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGHRGINQPVKD 313

Query: 288 LLTGKSEITSQNHGFVVDAEQLK---------NHPDVEITHINLNDNTVEGMRMRTKPAF 338
           L TGK E+T+ NHGF VDA   K          +  V ++HI+LND+ VEG++    PAF
Sbjct: 314 LTTGKVEVTAHNHGFAVDAPIGKQVDAPFENGKYGKVFVSHIDLNDDVVEGLQCVDIPAF 373

Query: 339 SVQYHPESSPGPHDSTYLFDEFVALLEKS 367
           SVQYHPE++ GPHD+ YLFD F  L++ +
Sbjct: 374 SVQYHPEAAAGPHDAAYLFDRFCELMKNN 402