Pairwise Alignments

Query, 192 a.a., RNA polymerase subunit sigma-24 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Dechlorosoma suillum PS

 Score = 64.7 bits (156), Expect = 1e-15
 Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 13/174 (7%)

Query: 11  EEKLIDGCIAGKRDMQRLLYDLYSKKMMAVCLRYAPTTFEAEDIMQDAFVKVFNNLQTFK 70
           ++KL++   +G +    LL   Y +K+  +  R+     E ED+ Q+AF+K +  L +F+
Sbjct: 7   DQKLVERAQSGDKKAFELLVAKYQRKLGRLLSRFIRDPAEVEDVAQEAFIKAYRALPSFR 66

Query: 71  RDCPVEFWIRRIMINTALKHL--RSKQLLTVSHESEEVANLSADDVNLSGYSLDELL--- 125
            D     W+ RI INTA  +L  + ++  T +    E A    D   L   +  E L   
Sbjct: 67  GDSAFYTWLYRIGINTAKNYLVAQGRRAPTSTEFDSEEAETFDDGEQLRDINTPENLLLS 126

Query: 126 --------SMIQSLAPRYRMVFNLYAIEGYNHKEIGEMLGISEGTSKSQYSRAR 171
                   + + +L    R    L  +EG +++EI +++    GT +S+  RAR
Sbjct: 127 KQIGETVNAAMDALPEELRTAIMLRELEGLSYEEIAKIMDCPIGTIRSRIFRAR 180