Pairwise Alignments

Query, 774 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1343 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 43.9 bits (102), Expect = 6e-08
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 15/134 (11%)

Query: 497 PVADASNLSQI---VIDAYGQKWLSIARRQNSRSGLVVYDEKQNKARLLSTGEGN-GNLP 552
           P+A   ++ Q      D     WL       + +G+ +YD+           E +  NL 
Sbjct: 253 PLAAIKDIRQFRCATTDTMNNIWLG------TENGIFIYDQTFRLVTHYQQSESDLSNLN 306

Query: 553 SSSLYALAKDLNGDIWVGTASGVGVYYNPAFVFESQQYDARIPIIDGRPLLDGQAVRTIA 612
            S +Y+L +D N ++WVGT  G GV Y   F++ S Q+    P  +    L G+AVR I 
Sbjct: 307 DSPIYSLFEDYNHNMWVGTYFG-GVNY---FIYASDQFRI-YPYGNSPNHLSGKAVRQII 361

Query: 613 VDGANRKWMGTDNG 626
               N  ++ T++G
Sbjct: 362 NTPDNGLYIATEDG 375



 Score = 41.6 bits (96), Expect = 3e-07
 Identities = 57/223 (25%), Positives = 84/223 (37%), Gaps = 45/223 (20%)

Query: 463 DEAGNVW------AVNRNQQNGGAGLHKLTPDGAWEAFRLPVADASNLSQIVIDAYGQKW 516
           DE G +W           +QNG   L K++         LPV    NL+  +I      W
Sbjct: 452 DETGKIWYGGPSGLFTLKKQNGSFQLKKVSA--------LPVFCMLNLNDSII------W 497

Query: 517 LSIARRQNSRSGLVVYDEKQNKARLLSTGEGNGNLPSSSLYA--LAKDLNGDIWVGTAS- 573
                  N ++G+   +++  +   L          SS LY   L  D  G+IW GT + 
Sbjct: 498 TG-----NRQNGIYQINKRTEEQTPLP------QFSSSKLYMTYLYMDSQGNIWAGTNND 546

Query: 574 GVGVYYNPAFVFESQQYDARIPIIDGRPLLDGQAVRTIAVDGANRKWMGTDNGLWLFGPD 633
           G+ V        +S            +  L   A++ I  D  N  W+GTDNGL    P 
Sbjct: 547 GLFVLNKKGEKLKSYS----------KKELGSNAIKGIIEDDQNTIWIGTDNGLCNIQPK 596

Query: 634 GDELIYHFTTQNSPLPSDTVLSVGVEHRLGEVFIATTAGVASF 676
              LI  +T  +    +    S   +   GE+F  T  G+ SF
Sbjct: 597 SG-LISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISF 638



 Score = 35.8 bits (81), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)

Query: 501 ASNLSQIVIDAYGQKWLSIARRQNSRSGLVVYDEKQNKARLLSTGEGNGNLPSSSLYALA 560
           A N+  ++ID+    W+ +  R     G+  Y  K+NK   LS  +G G   +SS + + 
Sbjct: 400 ARNIHSLLIDSKQNLWIGLFLR-----GMNYYMPKENKT--LSFNDGMGK--NSSGFCII 450

Query: 561 KDLNGDIWVGTASGV 575
           +D  G IW G  SG+
Sbjct: 451 EDETGKIWYGGPSGL 465



 Score = 35.0 bits (79), Expect = 3e-05
 Identities = 33/154 (21%), Positives = 56/154 (36%), Gaps = 37/154 (24%)

Query: 527 SGLVVYDEKQNKARLLSTGEGNGNLPSSSLYALAKDLNGDIWVGTASGVGVYYNPAFVFE 586
           +G+  YD ++N        EG G     ++  L +D N  +W+ +  GV  Y      FE
Sbjct: 154 NGIYQYDNEKNSFTPFILNEGKGE----NIRGLVEDSNNVLWINSNKGVKRYNLKKEQFE 209

Query: 587 SQQYDAR--------IPIIDGRPLL------------------------DGQAVRTIAVD 614
               + R        + ++ G  LL                        D +  R    D
Sbjct: 210 PLPLNIRPFLETCIQLVMLPGNQLLFNTPQEVFVYNINNDSLYPLAAIKDIRQFRCATTD 269

Query: 615 GANRKWMGTDNGLWLFGPDGDELIYHFTTQNSPL 648
             N  W+GT+NG++++      L+ H+    S L
Sbjct: 270 TMNNIWLGTENGIFIY-DQTFRLVTHYQQSESDL 302



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 421 NGLLEWGGPGNTQLYNRTNSTLLSTLPADDPNNQVRVTDVAVDEAGNVWAVNRNQQNGGA 480
           N  + W G     +Y     T   T      ++++ +T + +D  GN+WA   N      
Sbjct: 492 NDSIIWTGNRQNGIYQINKRTEEQTPLPQFSSSKLYMTYLYMDSQGNIWAGTNND----- 546

Query: 481 GLHKLTPDG-AWEAFRLPVADASNLSQIVIDAYGQKWLSIARRQNSRSGLVVYDEKQNKA 539
           GL  L   G   +++      ++ +  I+ D     W+       + +GL      Q K+
Sbjct: 547 GLFVLNKKGEKLKSYSKKELGSNAIKGIIEDDQNTIWI------GTDNGLC---NIQPKS 597

Query: 540 RLLSTGEGNGNLPSS--SLYALAKDLNGDIWVGTASGVGVYY 579
            L+S       LP++  +  ++ K  +G+++ GT +G+  +Y
Sbjct: 598 GLISRYTIADGLPTNQFNYSSVCKKPDGELFFGTINGMISFY 639