Pairwise Alignments

Query, 774 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1326 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 48.9 bits (115), Expect = 2e-09
 Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 50/224 (22%)

Query: 525 SRSGLVVYDEKQNKARLLSTGEGNG-NLPSSSLYALAKDLNGDIWVGTASGVGVYYNPAF 583
           + SGL +Y+ +  K   L    G+  ++  +++Y++ KD  G IW+G+  G   YY   +
Sbjct: 284 TESGLYIYNLRTKKTVHLRNVSGDPYSISDNAIYSICKDREGGIWIGSYFGGVNYYPKQY 343

Query: 584 VFESQQYDARIPIIDGRPLLD--GQAVRTIAVDGANRKWMGT-DNGLWLFGP-------- 632
            +  + Y         R  +D  G+ VR    D     W+GT D GL+ + P        
Sbjct: 344 TYFDKVYP--------RTEIDEMGKRVREFCADHDGTLWIGTEDKGLFHYYPSTGLIEPF 395

Query: 633 --------------DGD--------------ELIYHFTTQNSPLPSDTVLSVGVEHRLGE 664
                         DG+              +L  H        P+D + S+      G 
Sbjct: 396 RHPDIYHNVHGLCLDGNYLWVGHFAKGLNRIDLRTHAVKHYFDAPND-IFSI-CRTTSGN 453

Query: 665 VFIATTAGVASFRSDATVTEGEPECAMVFPNPVRRDYTGQIGIS 708
           +++ TTAG+  + S+    E  PE   VF   ++ D  G + ++
Sbjct: 454 LWLGTTAGLFRYHSETNRFERVPELGWVFIYNIKEDKQGNLWLA 497



 Score = 38.9 bits (89), Expect = 2e-06
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 18/118 (15%)

Query: 548 NGNLPSSSLYALAKDLNGDIWVGTASGVGVYYNPAFVFESQQYDARIPIIDGRPLLDGQA 607
           N  L  ++++A+ +D  G +W GT  G+  Y   +F    ++             L    
Sbjct: 36  NNGLSQNTVHAILQDKQGFMWFGTKDGLDRYDGISFRAFMKESGT----------LGNNF 85

Query: 608 VRTIAVDGANRKWMGTDNGLWLFGPDGDELIYHFTTQNSPLPSDTVLSVGVEHRLGEV 665
           + ++  D   + W+GTD GL+++ P+      H T +   + SD  L  G+++ +  V
Sbjct: 86  ITSLYEDQQGQIWIGTDVGLYVYSPE------HETVERFIMKSD--LDTGIDYTVNLV 135



 Score = 35.0 bits (79), Expect = 3e-05
 Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 57/280 (20%)

Query: 316 WVADYTKGLVRINLNNNDAAAF--APNGPYASNSFAVYTSGGKVYVLSGGYSESYAPQGL 373
           WV  + KGL RI+L  +    +  APN  ++       T+ G +++            G 
Sbjct: 415 WVGHFAKGLNRIDLRTHAVKHYFDAPNDIFS----ICRTTSGNLWL------------GT 458

Query: 374 HEGFYVYEKGEWQNFNQVTDGGFSAARDLVAAAYNPVTDK---VYFASYGNGLLEWG--- 427
             G + Y   E   F +V + G+          YN   DK   ++ A+Y +G+ +     
Sbjct: 459 TAGLFRYH-SETNRFERVPELGW-------VFIYNIKEDKQGNLWLATYIDGVYKRNVRT 510

Query: 428 GPGNTQLYNRTNSTLLSTLPADDPNNQVRVTDVAVDEAGNVWAVNRNQQNGGAGLHKLTP 487
           G     +++ TN       P+  P+N  +V  +  D    +W   +     G G  +  P
Sbjct: 511 GEWEHYMHDETN-------PSSLPSN--KVLSIFEDSQNQLWFTTQ-----GGGFCRFDP 556

Query: 488 DG-AWEAFRLPVADASN-LSQIVIDAYGQKWLSIARRQNSRSGLVVYDEKQNKARLLSTG 545
            G  +  +   +   SN + +I  D  G  W++      +  GLV ++ K  + ++ +  
Sbjct: 557 SGKIFVRYDSSIGLPSNVVHRIEEDEKGLFWIT------TNKGLVHFNPKTLEFKVYTI- 609

Query: 546 EGNGNLPSSSLYALA-KDLNGDIWVGTASGVGVYYNPAFV 584
             NG L +   Y  + KD NG I+ G+ +G   +    FV
Sbjct: 610 -ANGLLSNQFNYQSSYKDKNGRIYFGSINGFISFEPSVFV 648



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 10/119 (8%)

Query: 554 SSLYALAKDLNGDIWVGTASGVGVYYNPAFVFESQQYDARIPIIDGRPLLDGQAVRTIAV 613
           + ++++ +  +G++W+GT +G+  Y++    FE       + I + +    G       +
Sbjct: 441 NDIFSICRTTSGNLWLGTTAGLFRYHSETNRFERVPELGWVFIYNIKEDKQGNLWLATYI 500

Query: 614 DGANRKWMGTDNGLWLFGPDGDELIYHFTTQNSPLPSDTVLSVGVEHRLGEVFIATTAG 672
           DG  ++ + T  G W       E   H  T  S LPS+ VLS+  E    +++  T  G
Sbjct: 501 DGVYKRNVRT--GEW-------EHYMHDETNPSSLPSNKVLSI-FEDSQNQLWFTTQGG 549



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 15/136 (11%)

Query: 550 NLPSSSLYALAKDLNGDIWVGTASGVGVYYNPA---FVFESQQYDARIPIIDGRPLLDGQ 606
           +LPS+ + ++ +D    +W  T  G    ++P+   FV    +YD+ I        L   
Sbjct: 525 SLPSNKVLSIFEDSQNQLWFTTQGGGFCRFDPSGKIFV----RYDSSIG-------LPSN 573

Query: 607 AVRTIAVDGANRKWMGTDNGLWLFGPDGDELIYHFTTQNSPLPSDTVLSVGVEHRLGEVF 666
            V  I  D     W+ T+ GL  F P   E    +T  N  L +        + + G ++
Sbjct: 574 VVHRIEEDEKGLFWITTNKGLVHFNPKTLEFKV-YTIANGLLSNQFNYQSSYKDKNGRIY 632

Query: 667 IATTAGVASFRSDATV 682
             +  G  SF     V
Sbjct: 633 FGSINGFISFEPSVFV 648



 Score = 30.0 bits (66), Expect = 9e-04
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 10/72 (13%)

Query: 507 IVIDAYGQKWLSIARRQNSRSGLVVYDEKQNKARLLSTGEGNGNLPSSSLYALAKDLNGD 566
           I+ D  G  W        ++ GL  YD    +A +    + +G L ++ + +L +D  G 
Sbjct: 47  ILQDKQGFMWFG------TKDGLDRYDGISFRAFM----KESGTLGNNFITSLYEDQQGQ 96

Query: 567 IWVGTASGVGVY 578
           IW+GT  G+ VY
Sbjct: 97  IWIGTDVGLYVY 108



 Score = 27.7 bits (60), Expect = 0.004
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 504 LSQIVIDAYGQKWLSIARRQNSRSGLVVYD-EKQNKARLLSTGEGNGNLPSSSLYALAKD 562
           ++ +  D  GQ W+       +  GL VY  E +   R +   + +  +   ++  +  D
Sbjct: 86  ITSLYEDQQGQIWIG------TDVGLYVYSPEHETVERFIMKSDLDTGI-DYTVNLVTGD 138

Query: 563 LNGDIWVGTASGVGVYYNP 581
            +G IWV T S    YYNP
Sbjct: 139 KDGGIWVVTQSQAVFYYNP 157