Pairwise Alignments

Query, 877 a.a., DNA mismatch repair protein MutS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 862 a.a., DNA mismatch repair protein mutS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 501/862 (58%), Positives = 650/862 (75%), Gaps = 2/862 (0%)

Query: 12  LMKQYNAIKAKHPGALLLFRVGDFYETFGEDAIKASKILDIVLTKRGNGSASETALAGFP 71
           +MKQ+  +KAKHP A++LFR GDFYET+  DAI AS+IL I LTKR NG      +AGFP
Sbjct: 1   MMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAIVASEILGITLTKRANGKGKTIEMAGFP 60

Query: 72  HHSLDTYLPKLVRAGERVAICDQLEDPKTVKGIVKRGVTELVTPGVSFNDQVLERRSNNY 131
           HH+LDTYLPKL+RAG+RVAICDQLEDPK  K +VKRG+TELVTPGVS ND VL  + NN+
Sbjct: 61  HHALDTYLPKLIRAGKRVAICDQLEDPKLTKKLVKRGITELVTPGVSINDNVLNYKENNF 120

Query: 132 LAAVHFGKTETGVSFLDVSTGEFITAQGDKSYIGKLLQSLAPAEVLFCKREKETFFERYG 191
           LAAVHFGK   GV+FLD+STGEF+TA+G   Y+ KLL +  P E+LF + ++  F   +G
Sbjct: 121 LAAVHFGKASCGVAFLDISTGEFLTAEGPFDYVDKLLNNFGPKEILFERGKRLMFEGNFG 180

Query: 192 PDFRYYALEEWVFNYDFAYESLTRQFSTASLKGFGIEGMREGIVSAGAILHYLSETQHNE 251
             F  + L++WVF    A E L + F T +LKGFG+E ++ GI+++GAIL YL+ TQH +
Sbjct: 181 SKFFTFELDDWVFTESTAREKLLKHFETKNLKGFGVEHLKNGIIASGAILQYLTMTQHTQ 240

Query: 252 ISHIATISRLEEDKYVWLDRFTVRNLELVYPQHPEGVPLINVLDQTVTPMGARLLKKWVV 311
           I HI +++R+EEDKYV LD+FTVR+LEL+   +  G  L+NV+D+T++PMGARLLK+W+V
Sbjct: 241 IGHITSLARIEEDKYVRLDKFTVRSLELIGSMNDGGSSLLNVIDRTISPMGARLLKRWMV 300

Query: 312 LPLKDVTQIRRRLDTVEALTQHQELLEELVLHLKQINDLERLISKVAVRRVNPRELVQLA 371
            PLKD   I  RL+ VE   +  +  E +   L  I DLER+ISKVAV RV+PRE+VQL 
Sbjct: 301 FPLKDEKPINDRLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVAVGRVSPREVVQLK 360

Query: 372 KALEAILPIQKVLALSDIPALQKLAAQLAPCDGLREEIRNVLKPEPPMLTNQGNMINEGV 431
            AL+AI PI++    +D  +L ++  QL  C  +R+ I   +  +PP+L N+G +I +GV
Sbjct: 361 VALQAIEPIKQACLEADNASLNRIGEQLNLCISIRDRIAKEINNDPPLLINKGGVIKDGV 420

Query: 432 NEELDELRAIAFSGKDYLAQLQQREIKNTGISSLKIAYNKVFGYYLEVTHAHKDKVPSTW 491
           NEELDELR I++SGKDYL Q+QQRE + TGI SLK+AYN VFGYY+EV + HKDKVP  W
Sbjct: 421 NEELDELRRISYSGKDYLLQIQQRESEQTGIPSLKVAYNNVFGYYIEVRNIHKDKVPQEW 480

Query: 492 IRKQTLVNAERYITEELKTYEEKILNAEERIYTIEFGLFNELVLYAMDYVAQVQQNAKVI 551
           IRKQTLVNAERYIT+ELK YEEKIL AE++I  +E  L+ +LV    +++ Q+Q NA  I
Sbjct: 481 IRKQTLVNAERYITQELKVYEEKILGAEDKILVLETQLYTDLVQALTEFIPQIQINANQI 540

Query: 552 GVIDCLSAFAGIALSSSYVKPEVNDTHVLDIRKGRHPVIEKQLPLGEAYVPNDIFLDDEQ 611
             +DCL +FA +A  ++Y++P + D  VLDIR+GRHPVIEKQLP+GE Y+ ND+ LD   
Sbjct: 541 ARLDCLLSFANVARENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVMLDSAS 600

Query: 612 QQVIIITGPNMAGKSALLRQTALVVLMAQIGSFVPAEAATIGVIDKIFTRVGASDNLSKG 671
           QQ+IIITGPNMAGKSALLRQTAL+ L+AQIGSFVPAE+A IG++DKIFTRVGASDN+S G
Sbjct: 601 QQIIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVG 660

Query: 672 ESTFMVEMTETASILNNLSDRSLVLMDEIGRGTSTYDGISIAWAIVEHLHNHPKYKAKTL 731
           ESTFMVEM E A ILNN+S RSLVL DE+GRGTSTYDGISIAWAIVE++H HPK KA+TL
Sbjct: 661 ESTFMVEMNEAADILNNVSSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTL 720

Query: 732 FATHYHELNQLAEELPRVKNYNVSVREAGGKILFMRKLVPGGSEHSFGIHVAQMAGMPNN 791
           FATHYHELN++ +   R+KNYNVSV+E   K++F+RKL  GGSEHSFGIHVA+MAGMP +
Sbjct: 721 FATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKS 780

Query: 792 VVLRADEIMHHLEKEKVSEQAPQQKMKTAPKN--NFQLSMFELHDPQLERVKELMEQLDI 849
           +V RA+ I+  LE +   +    + +    +N    QLS F+L DP L ++++ +  LD+
Sbjct: 781 IVKRANTILKQLESDNRQQGISGKPLTEVSENRSGMQLSFFQLDDPILCQIRDEILNLDV 840

Query: 850 NTITPVEALLKLNELKLLLQDK 871
           N +TP+EAL KLN++K +++ K
Sbjct: 841 NNLTPIEALNKLNDIKKIVRGK 862