Pairwise Alignments

Query, 250 a.a., tRNA pseudouridine synthase A from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 269 a.a., tRNA pseudouridine synthase A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  251 bits (642), Expect = 8e-72
 Identities = 131/252 (51%), Positives = 165/252 (65%), Gaps = 3/252 (1%)

Query: 2   RYFLEIAYDGTRFHGWQVQPNALTVQEVLEDCLSKVLREKINTTGSGRTDTGVHASEQFV 61
           RYF+ +AYDGT +HGWQ+QPN  +VQE L   LS  LR  +   G+GRTD GVHAS    
Sbjct: 3   RYFIYLAYDGTNYHGWQIQPNGSSVQECLMKALSTFLRRDVEVIGAGRTDAGVHASLMVA 62

Query: 62  HFDSEQQLDPQQVVYRLNRILPDDISVRNLYLVPNEAHARFDAFARTYHYHIALHKNPFK 121
           HFD E  LD   V  +LNR+LP DISV  +  V  +AHARFDA ARTY Y++   K PF 
Sbjct: 63  HFDHEDVLDTVTVADKLNRLLPPDISVYRVRQVKPDAHARFDATARTYKYYVTTAKYPFN 122

Query: 122 RYYAWYHSRALDVEKMNEAAAILLKYEDFTTFSKVKGDTKHYRCEMYEAVW-RQEGEEL- 179
           R Y +    +LD E+MNEAA  L +Y DFT+FSK+  D K   C +  A W + EGE+  
Sbjct: 123 RQYRYRVYGSLDYERMNEAARTLFEYIDFTSFSKLHTDVKTNICHISHAEWTKMEGEDTT 182

Query: 180 -VFTIRANRFLRGMVRLIVGTLVDVGKGKLTVQEFEQVVASQNRSKSSGAAPSEGLYLAR 238
            VFTIRA+RFLR MVR IVGTL++VG+GKLTV+ F +V+  Q+R K+  +AP   L+L  
Sbjct: 183 WVFTIRADRFLRNMVRAIVGTLLEVGRGKLTVEGFRKVIEQQDRCKAGTSAPGNALFLVN 242

Query: 239 VEYPPHIIARST 250
           VEYP  I +  T
Sbjct: 243 VEYPEDIFSEET 254