Pairwise Alignments

Query, 370 a.a., DNA replication and repair protein RecF from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 361 a.a., SMC domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 93.6 bits (231), Expect = 8e-24
 Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 34/353 (9%)

Query: 5   NISLLFFKNYEEAALSFSEHINCFIGDNGSGKTNLLDAIHYLSMTKSAFPG-TDAQSIKQ 63
           ++SL  F+++    LS  E      G NG GKTN+L+A+ +LS  +      T+A    +
Sbjct: 8   SLSLSHFRSHTHLTLSLDERPVVLHGPNGIGKTNVLEALSFLSPGRGLRRAKTEAVGQSE 67

Query: 64  GEDFFMVKGRFEVGDAKHTVQVSLKQGQKKTVTHNKSPYDKISDHIGRFPVVLISPYDTD 123
               + V    + G  +  V      G  +TV  +  P  +++      P+V + P    
Sbjct: 68  AGLGWRVSALVKSGGREREVMTRSDAGASRTVQLDGKPVPQMA-LAELVPMVWLVPAMDR 126

Query: 124 LIREGSEERRKYFDSLISQLDHVYLEQLIQYNYILKQRNSLLKQFAERHYFDRDYLQILN 183
           L  E +E RRK+ D +       +   ++ Y   ++ RN LLK        D  +   L 
Sbjct: 127 LWIEAAEGRRKFLDRMTLNFVTTHGRDVLAYERAMRDRNRLLKDGVR----DPHWYHALE 182

Query: 184 EQLVPFGQQLVQARQRFLQEFVPIFQKHYHHISDSHEEVTLTYK---SQLEGHDFAYKLQ 240
            Q+   G ++ Q RQR L E           I  +  + T  +     Q+E HD    L+
Sbjct: 183 AQMAEAGARITQNRQRCLSE-----------IEAAQADATTAFPFAGLQIEAHDGRAPLR 231

Query: 241 QAERKDTALQ----------RTTVGPHKDDF--VFLMDGNPVKSFGSQGQQKSYVIALKL 288
                +  L+          RT  GPH+DD   V++  G P +   S G+QK+ +I+L L
Sbjct: 232 TKGEIENTLRCNRYMDQTAGRTLDGPHRDDLAAVYVSKGTPARDC-STGEQKALLISLIL 290

Query: 289 AHFEVMDQRQHHKPLLLLDDIFDRLDEKRITKLMQMVAAHTFGQIFLTDTHLE 341
           +    +       PL+LLD++   LD++R   L   + A    Q ++T T  E
Sbjct: 291 SMSRAVKSLVGQAPLVLLDEVAAHLDQERQRALYDEICA-LGAQAWMTGTGAE 342