Pairwise Alignments

Query, 760 a.a., ribonuclease R from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 813 a.a., exoribonuclease R from Marinobacter adhaerens HP15

 Score =  375 bits (962), Expect = e-108
 Identities = 224/699 (32%), Positives = 369/699 (52%), Gaps = 36/699 (5%)

Query: 86  LGVTDKAGREQVQNLVKALVRENKLLPVDDDKYMMNLKVDIITGRVDLANSKYAYIVSEE 145
           LG + + G E ++  + A+ R+ +L+      Y+   + D++TGRV      + ++V ++
Sbjct: 5   LGQSSEEGIEALRRRLIAMCRDGQLICNRRGAYLPIEEADLVTGRVIGHKDGFGFLVPDD 64

Query: 146 REEDVRVHTEHLQYAMDGDLVKVEVLPSVRGGRQEGVVVEVLQRSRSEMVGLMELSKNFG 205
              D+ +    ++    GD V   V      GR+EGV+VEVL+   S+ VG         
Sbjct: 65  GGSDLFLTARQMRQVFHGDRVAARVDRVDDRGRREGVIVEVLEYRTSQTVGRFFQESGIS 124

Query: 206 FVVPDFKRTYFDVFVGERHLNDAQSGDKVLVRIIEWPDKPGKNPTGEVIRVFGPAGEHEA 265
           FVVP+  R   +V + + +  +A+ G  V+V I+  P    + P G+V+ V G       
Sbjct: 125 FVVPENARINHEVLIPQENCGNARHGQYVVVDIVRQPTVRTQ-PLGKVVEVLGEHMAPGM 183

Query: 266 EIHSIMAEFGLPFEFPESVEEEAESISDKIPAGEIAKRRDFRDVTTFTIDPADAKDFDDA 325
           EI   +  + +P  +P +V E+  +I +++   +   R+D R++   TID   A+DFDDA
Sbjct: 184 EIDVAIRSYDIPHSWPPAVGEQTAAIPEEVTEKDKVNRKDIRNLRLVTIDDETARDFDDA 243

Query: 326 LSIQKLENGNWEIGVHIADVTHYVTPRSILEKEAFHRATSVYLVDRTIPMLPERLSNGLC 385
           +  +    G + + V IADV+HYV P + L++EA +R+TSVY  D  +PMLPE+LSNGLC
Sbjct: 244 VYCEPRARGGYRLLVAIADVSHYVRPGTPLDEEAVNRSTSVYFPDHVVPMLPEKLSNGLC 303

Query: 386 SLRPNEEKLTFSVVFELDENGKLYDTWYGRTIIYSDRRFAYEEAQERIE---TGEG---- 438
           SL P  ++L       +   G +    + + +++S  R  Y +    +E   T +G    
Sbjct: 304 SLNPGVDRLCMVADMTISAAGNISSYSFYQAVMFSHARLTYNKVSTMLEHPDTEQGYKLC 363

Query: 439 -DFAEEINLLNN---IAKKLQAKRFKNGAISFETVEVKFKLDENGKPLSVYVKERKDAHK 494
             +A  +  L+N   + + L+  R + GAI FET E K   D + K   +   +R DAHK
Sbjct: 364 EQYANVLPQLHNLYGLYQLLRKARTERGAIDFETTETKIVFDADRKIEEIVPVQRNDAHK 423

Query: 495 LIEEYMLLANKKVAEFVYNLSKGKKRPTMVYRTHGSPDPDRLSTFALFARKFGYKV-DPE 553
           +IEE ML AN   A F+    K  K P + YR H  P  +RL+   LF  + G ++   +
Sbjct: 424 IIEECMLCANVATARFL----KKHKLPAL-YRVHDGPSEERLNAVRLFLGELGLQLGGGD 478

Query: 554 GDISEELNHLTKEIEGKPEQSVLQNLAIRTMAKAKYSTEPEGHFGLAFAHYSHFTSPIRR 613
              S +   L   I+ + + +V+Q + +R++++A YS E  GHFGL +A Y+HFTSPIRR
Sbjct: 479 SPTSADYQELLNSIKDRSDANVIQTVMLRSLSQAVYSPEEGGHFGLGYAGYAHFTSPIRR 538

Query: 614 YPDMMAHRLLQHYLDGGKSA------------------DQEEYEERCRHSSEMEKRAADA 655
           YPD++ HR ++  + GG+ +                  D    E+   H+S  E+RA DA
Sbjct: 539 YPDLINHRAIKSVIHGGQPSKDVVPPPKPDPELAEYPYDMARMEQLGEHTSMAERRADDA 598

Query: 656 ERASIKYKQVEFMKDTIGNQYKGIVSGVTEWGIFVEIEENKCEGMVRLADINDDYYELDA 715
            R  + + + E++ D +G +Y G+++ V  +G FVE+     EG+V ++ ++ D++  D+
Sbjct: 599 TRDVMAWLKCEYLSDHVGEEYDGVIASVVPFGFFVELSGVYIEGLVHVSTLSGDFFHHDS 658

Query: 716 DNYRIIGRQTKRIISFGDEVLVEVKSANMADRTIDLDLI 754
             +R+IG +T      GDEV V+V    M DR IDL+LI
Sbjct: 659 AKHRLIGERTAMSFRLGDEVRVKVVRVGMEDRKIDLELI 697