Pairwise Alignments

Query, 760 a.a., ribonuclease R from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 718 a.a., ribonuclease R (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  685 bits (1768), Expect = 0.0
 Identities = 339/717 (47%), Positives = 487/717 (67%), Gaps = 4/717 (0%)

Query: 42  AREASARKEPSNRKGAPKSAKAVVLEVFSNSPDAVFTMRQVTRRLGVTDKAGREQVQNLV 101
           A++   +++ + ++ + K   A++++ F   P    +M+ +   L +T    +    +L+
Sbjct: 2   AKKKEKKEKKAGKRMSKKELAALLIDFFHAKPSETLSMKYIFSELHLTTHPQKMLCADLL 61

Query: 102 KALVRENKLLPVDDDKYMMNLKVDIITGRVDLANSKYAYIVSEEREEDVRVHTEHLQYAM 161
             L  ++ +  ++  K+ +N     + G     ++     + E   + + V   +  +AM
Sbjct: 62  HDLSDDDYISEIEKGKFRLNNHGTEMIGTFQRKSNGKNSFIPEGGGDPIFVAERNSAHAM 121

Query: 162 DGDLVKVEVLPSVRGGRQEGVVVEVLQRSRSEMVGLMELSKNFGFVVPDFKRTYFDVFVG 221
           + D VK+      +    EG V+E+L+R+    VG +E++K++ F+V + +    D+F+ 
Sbjct: 122 NNDKVKITFYAKRKNKDAEGEVIEILERANDTFVGTLEVAKSYAFLVTENRTLANDIFIP 181

Query: 222 ERHLNDAQSGDKVLVRIIEWPDKPGKNPTGEVIRVFGPAGEHEAEIHSIMAEFGLPFEFP 281
           +  L   ++GDK +V++ EWPDK  KNP G+VI + G AG++  E+H+I+AEFGLP+ +P
Sbjct: 182 KEKLKGGKTGDKAIVKVTEWPDK-AKNPIGQVIDILGVAGDNTTEMHAILAEFGLPYVYP 240

Query: 282 ESVEEEAESISDKIPAGEIAKRRDFRDVTTFTIDPADAKDFDDALSIQKLENGNWEIGVH 341
           ++VE  A+ I  +I   EIA+R DFR VTTFTIDP DAKDFDDALSI+ +++G WE+GVH
Sbjct: 241 KAVETAADKIPAEITPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVH 300

Query: 342 IADVTHYVTPRSILEKEAFHRATSVYLVDRTIPMLPERLSNGLCSLRPNEEKLTFSVVFE 401
           IADVTHYV    I++KEA  RATSVYLVDRTIPMLPERL N +CSLRPNEEKL FSV+F+
Sbjct: 301 IADVTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFD 360

Query: 402 LDENGKLYDTWYGRTIIYSDRRFAYEEAQERIETGEGDFAEEINLLNNIAKKLQAKRFKN 461
           + E G++ D+    T+I SDRRF YEEAQ+ IET  GDF EE+ +L+ IAK L+ KRF  
Sbjct: 361 ITEKGEVRDSRIVHTVINSDRRFTYEEAQQIIETKTGDFKEEVLMLDTIAKALREKRFAA 420

Query: 462 GAISFETVEVKFKLDENGKPLSVYVKERKDAHKLIEEYMLLANKKVAEFVYNLSKGKKRP 521
           GAI+F+  EVKF++DE GKP+SVY KE KDA+KL+EE+MLLAN+ VAE V  + K KK  
Sbjct: 421 GAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGRVPKNKKPK 480

Query: 522 TMVYRTHGSPDPDRLSTFALFARKFGYKVDPEG---DISEELNHLTKEIEGKPEQSVLQN 578
            + YR H  PDP++L   + F  +FGYKV   G   DIS+ +NHL  +I GK E+++++ 
Sbjct: 481 VLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKKEENLIET 540

Query: 579 LAIRTMAKAKYSTEPEGHFGLAFAHYSHFTSPIRRYPDMMAHRLLQHYLDGGKSADQEEY 638
           ++IR M KA+YST   GH+GLAF +Y+HFTSPIRR+PDMM HRL+  Y+DGG+S  + +Y
Sbjct: 541 VSIRAMQKARYSTHNIGHYGLAFDYYTHFTSPIRRFPDMMVHRLVTKYMDGGRSVSESKY 600

Query: 639 EERCRHSSEMEKRAADAERASIKYKQVEFMKDTIGNQYKGIVSGVTEWGIFVEIEENKCE 698
           E+ C HSS ME+ AA+AERASIKYKQVEFM + +G  Y G++SGVTEWG++VE+ ENKCE
Sbjct: 601 EDLCDHSSNMEQIAANAERASIKYKQVEFMSERLGQIYDGVISGVTEWGLYVELNENKCE 660

Query: 699 GMVRLADINDDYYELDADNYRIIGRQTKRIISFGDEVLVEVKSANMADRTIDLDLIE 755
           GMV + D++DDYYE D  NY + GR+  +I S GD + + V  AN+  + +D  LIE
Sbjct: 661 GMVPIRDLDDDYYEFDEKNYCLRGRRKNKIYSLGDAITIRVARANLEKKQLDFALIE 717