Pairwise Alignments

Query, 760 a.a., ribonuclease R from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 809 a.a., RNAse R (RefSeq) from Shewanella sp. ANA-3

 Score =  360 bits (923), Expect = e-103
 Identities = 216/716 (30%), Positives = 366/716 (51%), Gaps = 26/716 (3%)

Query: 58  PKSAKAVVLEVFSNSPDAVFTMRQVTRRLGVTDKAGREQVQNLVKALVRENKLLPVDDDK 117
           P  ++  ++E +  S  +  T   +   L + D+   E ++  ++A+ R+ +L+      
Sbjct: 17  PIPSREYIIE-YLRSQKSPITRDSIAVALQIHDEEQLEALRRRLRAMERDGELVFTRGQS 75

Query: 118 YMMNLKVDIITGRVDLANSKYAYIVSEEREEDVRVHTEHLQYAMDGDLVKVEVLPSVRGG 177
           Y +  K+D+I+G V      Y +   +E  +D+ +    +     GD V  +     R G
Sbjct: 76  YGLPEKMDLISGTVLGHREGYGFFKPDEGGDDLFISNRDMLMYFHGDKVLAQKAGMDRKG 135

Query: 178 RQEGVVVEVLQRSRSEMVGLMELSKNFGFVVPDFKRTYFDVFVGERHLNDAQSGDKVLVR 237
           R+E  +V ++Q   + +VG   +     FV+ D KR   ++ +     N A+ GD V+V 
Sbjct: 136 RREARIVRLIQPRSAAIVGRFHVDSGMAFVIADDKRITQEILIATEDRNGARQGDVVVVE 195

Query: 238 IIEWPDKPGKNPTGEVIRVFGPAGEHEAEIHSIMAEFGLPFEFPESVEEEAESISDKIPA 297
           +   P +  K   G+V  V G       EI   +  + LP  +   +E++   I D++  
Sbjct: 196 LTRRPGRFVK-AAGKVTEVLGKQMAPGMEIEIALRNYDLPHTWSAVIEKKLRRIPDEVTE 254

Query: 298 GEIAKRRDFRDVTTFTIDPADAKDFDDALSIQKLENGNWEIGVHIADVTHYVTPRSILEK 357
            +   R D RD+   TID  DA+DFDDA+  +   +G W + V IADV++YV   S L+ 
Sbjct: 255 ADKVGRVDLRDLPLVTIDGEDARDFDDAVYAEVKPSGGWRLWVAIADVSYYVRTDSALDT 314

Query: 358 EAFHRATSVYLVDRTIPMLPERLSNGLCSLRPNEEKLTFSVVFELDENGKLYDTWYGRTI 417
           EA  R  SVY   + IPMLPE++SNGLCSL P+ ++L       +   GKL    +   +
Sbjct: 315 EARARGNSVYFPSQVIPMLPEKISNGLCSLNPHVDRLCMVAEMTISARGKLSGYKFYPAV 374

Query: 418 IYSDRRFAYEEAQERIETG-----EGDFAEEINLLNNIAKKLQAKRFKNGAISFETVEVK 472
           ++S  RF Y +    +E G            +  L ++   L  +R + GAI+FET+E +
Sbjct: 375 MHSHARFTYTQVAAMLEGGPIAPEHEALFPHLQCLQSLYLALDEQRAERGAIAFETLETQ 434

Query: 473 FKLDENGKPLSVYVKERKDAHKLIEEYMLLANKKVAEFVYNLSKGKKRPTMVYRTHGSPD 532
           F  ++  K   +  + R  AHK+IEE M+LAN   A+FV      K +  ++YR H SP 
Sbjct: 435 FIFNDQRKIDKIVPRARNQAHKIIEECMILANVSAAKFV-----KKHKGEILYRVHESPS 489

Query: 533 PDRLSTFALFARKFGYKVDPEGD-ISEELNHLTKEIEGKPEQSVLQNLAIRTMAKAKYST 591
             +L+ F  F  + G  +    +    +  ++  +I  +P+  ++Q + +R+M +A Y+ 
Sbjct: 490 EQKLANFKEFLAERGLSMGGGLEPTPADYQNVMLQIADRPDAELIQVMLLRSMRQAIYTP 549

Query: 592 EPEGHFGLAFAHYSHFTSPIRRYPDMMAHRLLQHYL-------------DGGKSADQEEY 638
           + EGHFGLA   Y+HFTSPIRRYPD++ HR++++ L             DGG     +E 
Sbjct: 550 DNEGHFGLALEEYAHFTSPIRRYPDLVLHRVIRYLLAKEKGEANEKWTSDGGYHYQLDEL 609

Query: 639 EERCRHSSEMEKRAADAERASIKYKQVEFMKDTIGNQYKGIVSGVTEWGIFVEIEENKCE 698
           +      S  E+RA +A R    + + EFM+D +G+ ++ +++ VT +G+FV + +   +
Sbjct: 610 DLLGEECSNTERRADEATRDVSDWLKCEFMQDHVGDTFEAVIASVTNFGLFVRLNDLFID 669

Query: 699 GMVRLADINDDYYELDADNYRIIGRQTKRIISFGDEVLVEVKSANMADRTIDLDLI 754
           G+V ++ +  DYY+ D    R+IG  T +I   GD V V+V + N+ DR IDL ++
Sbjct: 670 GLVHISSLGSDYYQFDPMRQRLIGEHTGQIYQVGDPVTVKVAAVNLDDRQIDLVML 725