Pairwise Alignments

Query, 459 a.a., DNA repair protein RadA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  349 bits (895), Expect = e-100
 Identities = 183/426 (42%), Positives = 266/426 (62%), Gaps = 6/426 (1%)

Query: 3   KIKTSYFCQNCGAQSAKWIGKCPACGEWNTYVEEVVQREEVTPTTAWKVGTSSAQVSNKP 62
           K++ +Y C  CGA++ +W G+CPAC EWNT    V  RE        + G SS    ++ 
Sbjct: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGA---RPGASSVGAQSRA 58

Query: 63  KPIADISYQEQQRIVTQDQELNRVLGGGIVPGSMVLIGGEPGIGKSTLMLQIA--LSLRG 120
           +P+ D++    +   +    L+RVLG G+VPG+ +L+GGEPGIGKSTL+LQ+A  ++  G
Sbjct: 59  QPLKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAG 118

Query: 121 LKVLYVSGEESEQQIKMRAERLLAQTSDCFILTETGTQNIFKQVEQIR-PQVLIIDSIQT 179
             VLY+SGEES  Q+K RA RL     +   +  T   ++   +E    P +LI+DS+QT
Sbjct: 119 RGVLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQT 178

Query: 180 LHSSFIEAGAGSVSQVRECTAELLKFAKESGTPVFLIGHITKEGNLAGPKILEHMVDTVL 239
           + S   E   G+VSQVR  + E+++  K SGT V L+GH+TK+G LAGP++LEH+VDTV+
Sbjct: 179 VSSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVI 238

Query: 240 QFEGDRHMTYRILRTTKNRFGSTSELGIYEMMGSGLREVSNPSEILISQREDAFSGISIG 299
             EGDR   +R+LR  KNRFG   EL ++ M+  G+  V +PS   +  R+ A SG ++ 
Sbjct: 239 SIEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALV 298

Query: 300 ATLEGNRPLLIEVQSLVSPATYGTPQRTSTGFDAKRLNMLLAVLEKRGGYRLGAQDVFLN 359
             ++G RPL +EVQ+LV+ +    P+RT  GFD  RL++LLAVLEKR     G  D++  
Sbjct: 299 MAVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAK 358

Query: 360 IAGGLKVEDPALDLAVCASILSSFEDMPISNTACFAAEVGLGGEVRAVNRVENRITEAEK 419
           I GG+K++DP +DL + A++LSSF D+P+   A F  EV L G+VR V     R  +A +
Sbjct: 359 IGGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARR 418

Query: 420 LGFTDI 425
           LG+T I
Sbjct: 419 LGYTPI 424