Pairwise Alignments

Query, 459 a.a., DNA repair protein RadA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 455 a.a., DNA repair protein RadA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  380 bits (977), Expect = e-110
 Identities = 201/438 (45%), Positives = 280/438 (63%), Gaps = 11/438 (2%)

Query: 1   MAKIKTSYFCQNCGAQSAKWIGKCPACGEWNTYVEEVVQREEVTPTTAWKVGTSSAQVSN 60
           MAK  T + C  CGA  +KW G+C  CG WN+  EEV       P +A     S   +  
Sbjct: 1   MAKPATRFICAECGAAHSKWSGRCDGCGAWNSISEEV-------PLSAGPSKKSLGGIRG 53

Query: 61  KPKPIADISYQEQQ--RIVTQDQELNRVLGGGIVPGSMVLIGGEPGIGKSTLMLQIALSL 118
           K  P+ D++ ++    R  +Q +EL+RVLGGG+V  S VL+GG+PGIGKSTL+LQ A S 
Sbjct: 54  KKVPLGDLASEDAPPPRRTSQLEELDRVLGGGLVDASAVLVGGDPGIGKSTLLLQAAASF 113

Query: 119 R--GLKVLYVSGEESEQQIKMRAERLLAQTSDCFILTETGTQNIFKQVEQIRPQVLIIDS 176
              G K +Y+SGEE+  Q++MRA RL    +   +  ET  ++I   +E   P + I+DS
Sbjct: 114 ARAGAKAVYISGEEATSQVRMRARRLGLADAAVKLGAETNLRDILTTLEAEAPDLAILDS 173

Query: 177 IQTLHSSFIEAGAGSVSQVRECTAELLKFAKESGTPVFLIGHITKEGNLAGPKILEHMVD 236
           IQTL S  +++  GSV+QVR C  EL+ FAK SGT V L+GH+TKEG +AGP+++EHMVD
Sbjct: 174 IQTLWSDTVDSAPGSVAQVRACAHELVTFAKRSGTSVILVGHVTKEGQIAGPRVVEHMVD 233

Query: 237 TVLQFEGDRHMTYRILRTTKNRFGSTSELGIYEMMGSGLREVSNPSEILISQREDAFSGI 296
           TVL FEG+R   +RILR+ KNRFG   E+G++EM G+GL EV+NPS + +S R+    G 
Sbjct: 234 TVLYFEGERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVANPSALFLSGRDAPAPGS 293

Query: 297 SIGATLEGNRPLLIEVQSLVSPATYGTPQRTSTGFDAKRLNMLLAVLEKRGGYRLGAQDV 356
            + A +EG RP+L E+Q+LV+P+     +RT  G+D+ RL+M+LAVLE R G      DV
Sbjct: 294 VVFAGIEGTRPVLCELQALVAPSALANARRTVVGWDSGRLSMILAVLEARCGIPFTGLDV 353

Query: 357 FLNIAGGLKVEDPALDLAVCASILSSFEDMPISNTACFAAEVGLGGEVRAVNRVENRITE 416
           +LN+AGGL++ +PA DLAV  ++LS+ ED+ +        E+ L G +R V + ENR+ E
Sbjct: 354 YLNVAGGLRIGEPAADLAVATALLSAREDIALPAEMVVFGEISLSGALRPVGQTENRLKE 413

Query: 417 AEKLGFTDIYISKYNKKG 434
           A KLGFT       +K G
Sbjct: 414 AAKLGFTKALAPAGSKTG 431