Pairwise Alignments

Query, 459 a.a., DNA repair protein RadA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 453 a.a., DNA repair protein RadA from Cupriavidus basilensis FW507-4G11

 Score =  377 bits (968), Expect = e-109
 Identities = 208/454 (45%), Positives = 284/454 (62%), Gaps = 12/454 (2%)

Query: 1   MAKIKTSYFCQNCGAQSAKWIGKCPACGEWNTYVEEVVQREEVTPTTA-WKVGTSSAQVS 59
           MAK K  Y C  CG  S +W G+CP C +WNT VE V +    TP+T  ++   +SA V 
Sbjct: 1   MAKPKNVYTCTECGGTSPRWQGQCPQCQQWNTLVESVAE----TPSTKRFQPLAASAMVQ 56

Query: 60  NKPKPIADISYQEQQRIVTQDQELNRVLGGGIVPGSMVLIGGEPGIGKSTLMLQIALSLR 119
                +++I   +  R  +  +E +RVLGGG+V G +VLIGG+PGIGKSTL+LQ   +L 
Sbjct: 57  R----LSEIDAADVPRFSSGIEEFDRVLGGGLVSGGVVLIGGDPGIGKSTLLLQALANLS 112

Query: 120 GLK-VLYVSGEESEQQIKMRAERLLAQTSDCFILTETGTQNIFKQVEQIRPQVLIIDSIQ 178
             + VLYVSGEES  QI +RA+RL   +    +L E   + I   +E  +P+V +IDSIQ
Sbjct: 113 AQRRVLYVSGEESGAQIALRAQRLGVDSPHLALLAEIQLEKIQATLEVEKPEVAVIDSIQ 172

Query: 179 TLHSSFIEAGAGSVSQVRECTAELLKFAKESGTPVFLIGHITKEGNLAGPKILEHMVDTV 238
           TL S  + +  GSV+QVREC A+L + AK +GT + L+GH+TK+G+LAGP++LEH+VDTV
Sbjct: 173 TLFSDALTSAPGSVAQVRECAAQLTRIAKSTGTTIILVGHVTKDGSLAGPRVLEHIVDTV 232

Query: 239 LQFEGDRHMTYRILRTTKNRFGSTSELGIYEMMGSGLREVSNPSEILISQREDAFSGISI 298
           L FEGD H ++R++R  KNRFG+ +ELG++ M   GLR VSNPS + +SQ E    G  +
Sbjct: 233 LYFEGDTHSSHRLIRAFKNRFGAVNELGVFAMTERGLRGVSNPSALFLSQHEQVVPGSCV 292

Query: 299 GATLEGNRPLLIEVQSLVSPATYGTPQRTSTGFDAKRLNMLLAVLEKRGGYRLGAQDVFL 358
             T EG RPLL+EVQ+LV  A    P+R + G +  RL MLLAVL +  G     QDVFL
Sbjct: 293 LVTQEGTRPLLVEVQALVDTANVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFL 352

Query: 359 NIAGGLKVEDPALDLAVCASILSSFEDMPISNTACFAAEVGLGGEVRAVNRVENRITEAE 418
           N  GG+K+ +PA DLAV  +I SS  + P+        E+GL GE+R   R ++R+ EA 
Sbjct: 353 NAVGGVKITEPAADLAVLLAIHSSMRNKPLPRGLVVFGEIGLAGEIRPSPRGQDRLREAA 412

Query: 419 KLGFTDIYISKYNKKGVDLSKFSINVHAYGRLEE 452
           KLGF+   I K N     +    + V A  RLE+
Sbjct: 413 KLGFSIAVIPKANAPKQKIE--GLEVIAVERLEQ 444