Pairwise Alignments

Query, 459 a.a., DNA repair protein RadA from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 454 a.a., DNA repair protein RadA (RefSeq) from Shewanella sp. ANA-3

 Score =  364 bits (934), Expect = e-105
 Identities = 193/432 (44%), Positives = 269/432 (62%), Gaps = 3/432 (0%)

Query: 1   MAKIKTSYFCQNCGAQSAKWIGKCPACGEWNTYVEEVVQREEVTPTTAWKVGTSSAQVSN 60
           MAK KT+Y C  CG    +W G+C AC EWNT  E  V+    +P    K    +   S+
Sbjct: 1   MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTITE--VRLGAASPGRGTKFAGYAGAGSS 58

Query: 61  KPKPIADISYQEQQRIVTQDQELNRVLGGGIVPGSMVLIGGEPGIGKSTLMLQIALSL-R 119
           + K +  I      RIV+   EL+RVLGGGIVPGS +LIGG PG GKSTL+LQ    L  
Sbjct: 59  EVKTLDQIDLNALPRIVSHFGELDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCHLAE 118

Query: 120 GLKVLYVSGEESEQQIKMRAERLLAQTSDCFILTETGTQNIFKQVEQIRPQVLIIDSIQT 179
            +  LYV+GEES QQ+ MRA RL   T+   +L+ET  + I +   Q  P+V+++DSIQ 
Sbjct: 119 QMPALYVTGEESLQQVAMRAHRLGLPTNKLRMLSETSVEQICEVALQESPKVIVVDSIQV 178

Query: 180 LHSSFIEAGAGSVSQVRECTAELLKFAKESGTPVFLIGHITKEGNLAGPKILEHMVDTVL 239
           +H S + +  GSVSQVRE  + L +FAK++G  V ++GH+TK+G+LAGPK+LEH +D  +
Sbjct: 179 MHMSDVASSPGSVSQVRESASYLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSV 238

Query: 240 QFEGDRHMTYRILRTTKNRFGSTSELGIYEMMGSGLREVSNPSEILISQREDAFSGISIG 299
            FEGD    YR LR+ KNRFG+ +ELG++ M   GL+EV+NPS I +S+ E+  SG  + 
Sbjct: 239 MFEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEESSGSLVM 298

Query: 300 ATLEGNRPLLIEVQSLVSPATYGTPQRTSTGFDAKRLNMLLAVLEKRGGYRLGAQDVFLN 359
              EG RPLL+E+Q LV  +    P+R + G DA RL MLLAV+ + GG ++  QDVF+N
Sbjct: 299 VVWEGTRPLLVELQVLVDNSAMSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVN 358

Query: 360 IAGGLKVEDPALDLAVCASILSSFEDMPISNTACFAAEVGLGGEVRAVNRVENRITEAEK 419
           + GG+KV + + DL +  +++SSF    + +      EVGL GE+R V   + R+ EA K
Sbjct: 359 VVGGVKVTETSADLTLLLAMVSSFRGDILPSDLVVFGEVGLSGEIRPVPNGQERLVEAAK 418

Query: 420 LGFTDIYISKYN 431
            GF    + + N
Sbjct: 419 HGFKRAIVPRAN 430