Pairwise Alignments

Query, 310 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 274 a.a., Small-conductance mechanosensitive channel from Pseudomonas stutzeri RCH2

 Score =  104 bits (260), Expect = 2e-27
 Identities = 67/263 (25%), Positives = 126/263 (47%), Gaps = 6/263 (2%)

Query: 16  EDWSDDIILMLPNLFVALVLLILTFYIAKVVRNTVDRVMGRFSHSAALNNLVTTLVYLGV 75
           E W   ++     + +AL+  +  +++   +   V  ++ R      L+  + +L  + +
Sbjct: 13  ESWLPVVLQYGAQVTLALLTFLFGWWLINTLTAKVSSLLQRRQVDPTLHGFIGSLASVVL 72

Query: 76  LVLGFFFVLNVLNLDKVVISLLAGVGIIGLALGFAFQDIAANFISGVIIAMQKPFGVGDM 135
            VL    V +++ ++    S +A +G  GLA+G A Q   ANF  GV+I + +PF VG+ 
Sbjct: 73  KVLLLVSVASMIGVETT--SFIAVIGAAGLAIGLALQGSLANFAGGVLILLFRPFRVGEW 130

Query: 136 IETNDYFGIIERITLRTVDIRKVTGELVKLPNKMVFENPLTNFSVHGVRRVDVEVGVSYA 195
           IE     G +  I +    ++    + V +PN  +    +TNFS    RR D+ +G+ Y+
Sbjct: 131 IEAQGIAGTVNSIQIFHTVLKTGDNKTVVVPNGALSNGHITNFSREPRRRADINIGIDYS 190

Query: 196 EDLEQVQQVVIEALQDVKNRVKTRDVEVMYDAFGDSSINFKARFWISYSRQVDYVGAKSD 255
            D++  +QV++E  +D +  ++  +  V     GDSS+N   R W++     D+      
Sbjct: 191 SDIKLARQVLLEIAEDPR-VLREPEPVVFVTGLGDSSVNLSLRVWVA---TADFWPVTFS 246

Query: 256 AIIRIKKAFDANDILIPFPIRTL 278
              + K+   A  + IPFP R +
Sbjct: 247 FTEQAKERLTAVGVGIPFPQRVV 269