Pairwise Alignments

Query, 310 a.a., mechanosensitive ion channel protein MscS from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 293 a.a., small-conductance mechanosensitive channel MscS from Pantoea sp. MT58

 Score =  106 bits (265), Expect = 6e-28
 Identities = 60/247 (24%), Positives = 122/247 (49%), Gaps = 5/247 (2%)

Query: 28  NLFVALVLLILTFYIAKVVRNTVDRVMGRFSHSAALNNLVTTLVYLGVLVLGFFFVLNVL 87
           N+  A+ ++ +   +A+++ NTV+R++        + + ++ LV  G++       L  +
Sbjct: 30  NIVAAIAIIFVGMIVARIISNTVNRLLCARHIDTTVADFLSALVRYGIIAFTLIAALGRI 89

Query: 88  NLDKVVISLLAGVGIIGLALGFAFQDIAANFISGVIIAMQKPFGVGDMIETNDYFGIIER 147
            +     S++A +G  GLA+G A +D  +N  +GV++ + + F  G+ ++     G +  
Sbjct: 90  GVQTT--SVIAILGAAGLAVGLALKDSLSNLAAGVLLVIFRHFRTGEFVDLGGIMGTVMN 147

Query: 148 ITLRTVDIRKVTGELVKLPNKMVFENPLTNFSVHGVRRVDVEVGVSYAEDLEQVQQVVIE 207
           + + +  ++   G+ V +PN  +    + NFS   VRR +  +GVSY  D++QV  ++ E
Sbjct: 148 VQIFSTTLKSADGKRVVVPNGKILAGNIVNFSREPVRRNEFIIGVSYDADVDQVLTLLRE 207

Query: 208 ALQDVKNRVKTRDVEVMYDAFGDSSINFKARFWISYSRQVDYVGAKSDAIIRIKKAFDAN 267
            ++  +  +K   +++  +    SS+NF  R W   S   D      D +   K+  D  
Sbjct: 208 VVEADERVLKDMGIQIGLNELAASSMNFVVRCW---SNSGDLQNVYWDLMKNFKRTLDGK 264

Query: 268 DILIPFP 274
            I IP+P
Sbjct: 265 GIGIPYP 271