Pairwise Alignments

Query, 978 a.a., helicase SNF2 from Pontibacter actiniarum KMM 6156, DSM 19842

Subject, 1070 a.a., Snf2 family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  360 bits (924), Expect = e-103
 Identities = 237/691 (34%), Positives = 352/691 (50%), Gaps = 34/691 (4%)

Query: 299  LSFKYGDYMVQAQEAKRVSVSMEKTQDSYIFHKLIRDANHEKE---------FVKELNNR 349
            L+F YGD ++    AK     + +   +Y  ++ + +     E         F+ ++ + 
Sbjct: 363  LAFIYGDVVLSGNAAKEALTLVTQGGTTYQINRALDEEQVAVETLQTLGFSRFIFDIGSL 422

Query: 350  ALEVRNGQAVLEKSEAFSWLNSNLQGLEEKGFTVQQSVRSGKNYFIGEITLDVGITEKND 409
            +   R G       E   ++  ++  L+ +G  V  +           +T+++    K  
Sbjct: 423  SSHWRLGALPDGIREWLQFIEEDVPRLQAQGVEVLLAPEFSLKVVDTALTVELD-DSKEG 481

Query: 410  WFDIYGTVRFGEFSVPFIRL-----KNHILTKNNEFLL---PNGQ----VAIIPEEWFTQ 457
            WF +          +P + L     K H    ++  LL   PNG+     A + +   + 
Sbjct: 482  WFSLSLHADINGQRLPMLPLVATWLKQHGEPADDAELLLPSPNGEWLKIKASVIKPLMSI 541

Query: 458  YIELFAFSEGEEHLTLKKHHMALVNDLQNGNLATVTMTRKLE---KLREFETIEDQPLPA 514
             +ELF    G   + L K+   L+N+L   +++ +   R  +   KL +F  +     P 
Sbjct: 542  ILELFEQHRGNS-IALPKYRAHLLNELAQSDISLLNGERVRQLAAKLEQFTGVVAVTAPT 600

Query: 515  GFMGELRPYQKAGYNWLHFVQNYKFGGCLADDMGLGKTVQTLAMLQHRKE----NGAESA 570
                ELRPYQ+ G NWL F++ Y+ GG LADDMGLGKT+QTLA L  +K+     G    
Sbjct: 601  QLQAELRPYQQQGLNWLCFLKEYQLGGILADDMGLGKTIQTLAFLLKQKQLKSAAGPHLP 660

Query: 571  SLLVMPTSLVYNWVNEAQKFTPNLRILNYTGTYRDKNVELFSNYDVVLTSYGIVRLDAEL 630
            SL++ PTSLV NW  EA KF P+L +    G  R   +   S +DVV+T+Y ++  D + 
Sbjct: 661  SLIICPTSLVGNWAKEAAKFAPSLTLAVIHGAQRGPLLARLSEFDVVVTTYPLMVRDNDY 720

Query: 631  LKTYYFDYIILDESQAIKNPDSNTSRSVRSLKSRHRLILTGTPVENSTMDLWSQMSFINP 690
             +   F++I+LDE+Q IKN  +  S+ +++L+S  +L LTGTP+EN   +L S M F  P
Sbjct: 721  YQAQAFEHIVLDEAQQIKNAQAKVSQMIKALQSPFKLCLTGTPLENHLGELKSLMDFCLP 780

Query: 691  GLLGNQHFFRNEFLKPIEKEKDEQKTRRLHALIKPFILRRHKSQVAKELPEKIEHTTFCK 750
            GLLG   +F  EF   IE+  D ++ + L   I PF+LRR K++V  ELP K E     +
Sbjct: 781  GLLGTTAYFNKEFRNRIERYGDSEQVKVLSQRIAPFVLRRTKAEVVTELPPKTEIYQSLE 840

Query: 751  MTEEQEHAYEETKSYYRNKILTSLEENGPGNTQFMLLQGLTKLRQIANHPLMT---DAGY 807
            + ++Q + YE  +     KI       G   +    L  L KLRQ    P +     A  
Sbjct: 841  LEKDQRNLYESIRLSMEKKIRELFATQGVAGSHIEFLDALLKLRQACCDPRLVKLEQAQK 900

Query: 808  EGESGKLKEVLRMTKNVVGKGHKVLIFSQFVKHLEIIRKALDEKGITYTYLDGNTKNRHE 867
               + KL  + +    +V +G K+LIFSQF   L +I + L    I Y+ L G T+ R  
Sbjct: 901  VKNNAKLNWLSQNLPEMVQEGRKILIFSQFTSMLILIEELLQSLEIDYSKLTGQTRLRQV 960

Query: 868  QVERFQADESIRVFLISLKAGGVGLNLTAADYVFILDPWWNPAVEAQAVDRAHRIGQQNT 927
            Q+++FQ  ++  VFLISLKAGG GLNLTAAD V   DPWWNPA E QA DRAHRIGQ+N 
Sbjct: 961  QIDKFQEGDT-PVFLISLKAGGTGLNLTAADTVIHYDPWWNPAAERQATDRAHRIGQENP 1019

Query: 928  VFTYKFITKDTVEEKILALQNRKIQLVTDLI 958
            VF YK I + TVEEKI  +Q  K  L   ++
Sbjct: 1020 VFVYKLIAEGTVEEKIQEMQQHKQGLADSIL 1050